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  5. LOC_Os04g33870.1

LOC_Os04g33870.1


Description : transcription factor (OFP)


Gene families : OG0000130 (Archaeplastida) Phylogenetic Tree(s): OG0000130_tree ,
OG_05_0000050 (LandPlants) Phylogenetic Tree(s): OG_05_0000050_tree ,
OG_06_0000302 (SeedPlants) Phylogenetic Tree(s): OG_06_0000302_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g33870.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00026640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.03 Archaeplastida
AT1G06920 OFP4, ATOFP4 ovate family protein 4 0.03 Archaeplastida
AT4G04025 No alias No description available 0.02 Archaeplastida
AT5G58360 ATOFP3, OFP3 ovate family protein 3 0.03 Archaeplastida
Gb_22142 No alias transcription factor (OFP) 0.05 Archaeplastida
LOC_Os01g64430.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os04g37510.1 No alias transcription factor (OFP) 0.03 Archaeplastida
MA_10434319g0010 No alias transcription factor (OFP) 0.02 Archaeplastida
MA_61037g0010 No alias transcription factor (OFP) 0.02 Archaeplastida
Pp3c1_110V3.1 No alias ovate family protein 8 0.01 Archaeplastida
Smo69626 No alias RNA biosynthesis.transcriptional activation.OFP... 0.02 Archaeplastida
Smo69627 No alias RNA biosynthesis.transcriptional activation.OFP... 0.04 Archaeplastida
Solyc06g074020.2.1 No alias transcription factor (OFP) 0.03 Archaeplastida
Solyc09g018200.1.1 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e007176_P001 No alias transcription factor (OFP) 0.04 Archaeplastida
Zm00001e008181_P001 No alias transcription factor (OFP) 0.04 Archaeplastida
Zm00001e019432_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e024171_P001 No alias transcription factor (OFP) 0.05 Archaeplastida
Zm00001e031752_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
Zm00001e031917_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
Zm00001e039401_P001 No alias transcription factor (OFP) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006458 Ovate_C 259 315
No external refs found!