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  5. AMTR_s00005p00155460

AMTR_s00005p00155460 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00005.47

Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0001291 (Archaeplastida) Phylogenetic Tree(s): OG0001291_tree ,
OG_05_0000813 (LandPlants) Phylogenetic Tree(s): OG_05_0000813_tree ,
OG_06_0001029 (SeedPlants) Phylogenetic Tree(s): OG_06_0001029_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00005p00155460
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AT3G06590 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT3G17100 No alias sequence-specific DNA binding transcription factors 0.04 Archaeplastida
LOC_Os03g19780.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_136773g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_415650g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_7709601g0010 No alias No annotation 0.04 Archaeplastida
Solyc12g042010.1.1 No alias transcription factor (bHLH) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!