Description : pectin methylesterase
Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0001525 (LandPlants) Phylogenetic Tree(s): OG_05_0001525_tree ,
OG_06_0001343 (SeedPlants) Phylogenetic Tree(s): OG_06_0001343_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os04g35770.1 | |
Cluster | HCCA: Cluster_338 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G23200 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT5G53370 | ATPMEPCRF, PMEPCRF | pectin methylesterase PCR fragment F | 0.03 | Archaeplastida | |
GSVIVT01012639001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
Pp3c10_25030V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Pp3c17_6440V3.1 | No alias | pectin methylesterase PCR fragment F | 0.02 | Archaeplastida | |
Solyc05g054360.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
BP | GO:0042545 | cell wall modification | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000439 | transcription factor TFIIH core complex | IEP | Neighborhood |
BP | GO:0000725 | recombinational repair | IEP | Neighborhood |
MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Neighborhood |
CC | GO:0005667 | transcription factor complex | IEP | Neighborhood |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Neighborhood |
BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
BP | GO:0006281 | DNA repair | IEP | Neighborhood |
BP | GO:0006289 | nucleotide-excision repair | IEP | Neighborhood |
BP | GO:0006310 | DNA recombination | IEP | Neighborhood |
BP | GO:0006950 | response to stress | IEP | Neighborhood |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Neighborhood |
MF | GO:0008963 | phospho-N-acetylmuramoyl-pentapeptide-transferase activity | IEP | Neighborhood |
MF | GO:0015095 | magnesium ion transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0015693 | magnesium ion transport | IEP | Neighborhood |
CC | GO:0016021 | integral component of membrane | IEP | Neighborhood |
BP | GO:0016311 | dephosphorylation | IEP | Neighborhood |
MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Neighborhood |
CC | GO:0031224 | intrinsic component of membrane | IEP | Neighborhood |
BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
CC | GO:0044422 | organelle part | IEP | Neighborhood |
CC | GO:0044425 | membrane part | IEP | Neighborhood |
CC | GO:0044432 | endoplasmic reticulum part | IEP | Neighborhood |
CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
CC | GO:0044798 | nuclear transcription factor complex | IEP | Neighborhood |
BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
BP | GO:0070838 | divalent metal ion transport | IEP | Neighborhood |
BP | GO:0072511 | divalent inorganic cation transport | IEP | Neighborhood |
CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000070 | Pectinesterase_cat | 178 | 474 |
No external refs found! |