Description : transcription factor (ARF)
Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0000395 (LandPlants) Phylogenetic Tree(s): OG_05_0000395_tree ,
OG_06_0003855 (SeedPlants) Phylogenetic Tree(s): OG_06_0003855_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os04g36054.1 | |
Cluster | HCCA: Cluster_97 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00029p00157690 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
AMTR_s00034p00110140 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
AMTR_s00092p00072950 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
AT1G19220 | ARF19, IAA22, ARF11 | auxin response factor 19 | 0.04 | Archaeplastida | |
AT1G59750 | ARF1 | auxin response factor 1 | 0.04 | Archaeplastida | |
AT5G37020 | ARF8, ATARF8 | auxin response factor 8 | 0.02 | Archaeplastida | |
AT5G60450 | ARF4 | auxin response factor 4 | 0.07 | Archaeplastida | |
GSVIVT01021552001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.05 | Archaeplastida | |
GSVIVT01025198001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.06 | Archaeplastida | |
Gb_23186 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Gb_32864 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Gb_39685 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
Gb_39686 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
LOC_Os04g56850.1 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
LOC_Os06g46410.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
MA_10432580g0010 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
MA_137387g0010 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
MA_40335g0010 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
MA_85955g0020 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Pp3c14_16990V3.1 | No alias | auxin response factor 6 | 0.03 | Archaeplastida | |
Pp3c17_19900V3.1 | No alias | auxin response factor 6 | 0.02 | Archaeplastida | |
Pp3c1_14480V3.1 | No alias | auxin response factor 6 | 0.03 | Archaeplastida | |
Pp3c26_11550V3.1 | No alias | auxin response factor 6 | 0.02 | Archaeplastida | |
Pp3c5_9420V3.1 | No alias | auxin response factor 2 | 0.03 | Archaeplastida | |
Solyc03g118290.3.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Solyc04g081240.2.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Solyc07g016180.3.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Solyc08g008380.4.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Solyc08g082630.3.1 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
Zm00001e006640_P002 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e013639_P001 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Zm00001e028396_P001 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e030325_P003 | No alias | transcription factor (ARF) | 0.08 | Archaeplastida | |
Zm00001e041866_P001 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0033643 | host cell part | IEP | Neighborhood |
CC | GO:0033646 | host intracellular part | IEP | Neighborhood |
CC | GO:0033647 | host intracellular organelle | IEP | Neighborhood |
CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0042025 | host cell nucleus | IEP | Neighborhood |
CC | GO:0044217 | other organism part | IEP | Neighborhood |
No external refs found! |