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  5. LOC_Os04g36650.1

LOC_Os04g36650.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000387 (SeedPlants) Phylogenetic Tree(s): OG_06_0000387_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g36650.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00186840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AMTR_s00079p00109960 evm_27.TU.AmTr_v1... Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
AMTR_s00124p00105750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AMTR_s00150p00049910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT1G13400 JGL, NUB C2H2 and C2HC zinc fingers superfamily protein 0.06 Archaeplastida
AT2G41940 ZFP8 zinc finger protein 8 0.03 Archaeplastida
AT2G42410 ZFP11, ATZFP11 zinc finger protein 11 0.03 Archaeplastida
AT4G17810 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Archaeplastida
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.02 Archaeplastida
GSVIVT01011610001 No alias No description available 0.03 Archaeplastida
GSVIVT01013168001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01035905001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
Gb_07777 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os05g20930.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Pp3c17_17640V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
Pp3c1_8210V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Pp3c20_10790V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Pp3c23_2190V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Pp3c23_800V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Pp3c23_960V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Smo110103 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
Solyc01g060420.2.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Solyc01g107430.2.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc06g061160.1.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e000996_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e003962_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e008019_P001 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida
Zm00001e025728_P002 No alias Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp.... 0.06 Archaeplastida
Zm00001e030783_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e034092_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e034219_P001 No alias C2H2 zinc finger transcription factor 0.11 Archaeplastida
Zm00001e034220_P001 No alias C2H2 zinc finger transcription factor 0.11 Archaeplastida
Zm00001e034221_P001 No alias C2H2 zinc finger transcription factor 0.11 Archaeplastida
Zm00001e036220_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e040612_P001 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida
Zm00001e040940_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!