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  5. LOC_Os04g36660.1

LOC_Os04g36660.1


Description : Calmodulin-binding protein 60 B OS=Arabidopsis thaliana (sp|q9fkl6|cb60b_arath : 662.0)


Gene families : OG0000559 (Archaeplastida) Phylogenetic Tree(s): OG0000559_tree ,
OG_05_0000828 (LandPlants) Phylogenetic Tree(s): OG_05_0000828_tree ,
OG_06_0001485 (SeedPlants) Phylogenetic Tree(s): OG_06_0001485_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g36660.1
Cluster HCCA: Cluster_314

Target Alias Description ECC score Gene Family Method Actions
AT2G24300 No alias Calmodulin-binding protein 0.03 Archaeplastida
AT5G62570 No alias Calmodulin binding protein-like 0.03 Archaeplastida
GSVIVT01003722001 No alias Calmodulin-binding protein 60 E OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01003724001 No alias Calmodulin-binding protein 60 E OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01029152001 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os12g36110.1 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 Archaeplastida
MpVg00510.1 No alias No annotation 0.02 Archaeplastida
Pp3c1_28930V3.1 No alias Calmodulin-binding protein 0.03 Archaeplastida
Solyc02g079040.3.1 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc03g113920.4.1 No alias Calmodulin-binding protein 60 A OS=Arabidopsis thaliana... 0.01 Archaeplastida
Solyc07g006830.4.1 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e008018_P001 No alias Calmodulin-binding protein 60 C OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e014847_P002 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e022743_P001 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
CC GO:0005795 Golgi stack IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
BP GO:0007031 peroxisome organization IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016151 nickel cation binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016972 thiol oxidase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031984 organelle subcompartment IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098791 Golgi subcompartment IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR012416 CBP60 104 395
No external refs found!