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Description : component LSm1 of U6-associated LSm accessory ribonucleoprotein complex
Gene families : OG0003134 (Archaeplastida) Phylogenetic Tree(s): OG0003134_tree ,
OG_05_0004554 (LandPlants) Phylogenetic Tree(s): OG_05_0004554_tree ,
OG_06_0004842 (SeedPlants) Phylogenetic Tree(s): OG_06_0004842_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os04g36810.1 | |
| Cluster | HCCA: Cluster_191 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre12.g538750 | No alias | RNA processing.RNA splicing.U6-associated LSm accessory... | 0.05 | Archaeplastida | |
| Gb_30103 | No alias | component LSm1 of U6-associated LSm accessory... | 0.02 | Archaeplastida | |
| Mp4g20900.1 | No alias | component LSm1 of U6-associated LSm accessory... | 0.03 | Archaeplastida | |
| Zm00001e040952_P001 | No alias | component LSm1 of U6-associated LSm accessory... | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000347 | THO complex | IEP | Neighborhood |
| CC | GO:0000445 | THO complex part of transcription export complex | IEP | Neighborhood |
| CC | GO:0000786 | nucleosome | IEP | Neighborhood |
| MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
| MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
| MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | Neighborhood |
| MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
| MF | GO:0003774 | motor activity | IEP | Neighborhood |
| MF | GO:0003777 | microtubule motor activity | IEP | Neighborhood |
| MF | GO:0005525 | GTP binding | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| BP | GO:0006413 | translational initiation | IEP | Neighborhood |
| BP | GO:0006457 | protein folding | IEP | Neighborhood |
| BP | GO:0006928 | movement of cell or subcellular component | IEP | Neighborhood |
| BP | GO:0007017 | microtubule-based process | IEP | Neighborhood |
| BP | GO:0007018 | microtubule-based movement | IEP | Neighborhood |
| BP | GO:0007034 | vacuolar transport | IEP | Neighborhood |
| BP | GO:0007346 | regulation of mitotic cell cycle | IEP | Neighborhood |
| MF | GO:0008017 | microtubule binding | IEP | Neighborhood |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Neighborhood |
| MF | GO:0015631 | tubulin binding | IEP | Neighborhood |
| BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
| CC | GO:0016272 | prefoldin complex | IEP | Neighborhood |
| BP | GO:0016485 | protein processing | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
| BP | GO:0032465 | regulation of cytokinesis | IEP | Neighborhood |
| MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0032954 | regulation of cytokinetic process | IEP | Neighborhood |
| BP | GO:0032955 | regulation of division septum assembly | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| CC | GO:0032993 | protein-DNA complex | IEP | Neighborhood |
| BP | GO:0043085 | positive regulation of catalytic activity | IEP | Neighborhood |
| BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Neighborhood |
| BP | GO:0044093 | positive regulation of molecular function | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| CC | GO:0044815 | DNA packaging complex | IEP | Neighborhood |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Neighborhood |
| MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Neighborhood |
| BP | GO:0051301 | cell division | IEP | Neighborhood |
| BP | GO:0051302 | regulation of cell division | IEP | Neighborhood |
| BP | GO:0051604 | protein maturation | IEP | Neighborhood |
| BP | GO:0051726 | regulation of cell cycle | IEP | Neighborhood |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Neighborhood |
| BP | GO:0065009 | regulation of molecular function | IEP | Neighborhood |
| BP | GO:1901891 | regulation of cell septum assembly | IEP | Neighborhood |
| BP | GO:1902412 | regulation of mitotic cytokinesis | IEP | Neighborhood |
| BP | GO:1903436 | regulation of mitotic cytokinetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001163 | LSM_dom_euk/arc | 16 | 81 |
| No external refs found! |