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  5. AMTR_s00005p00176760

AMTR_s00005p00176760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00005.58

No description available


Gene families : OG0000550 (Archaeplastida) Phylogenetic Tree(s): OG0000550_tree ,
OG_05_0000510 (LandPlants) Phylogenetic Tree(s): OG_05_0000510_tree ,
OG_06_0000872 (SeedPlants) Phylogenetic Tree(s): OG_06_0000872_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00005p00176760
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AT1G29520 No alias AWPM-19-like family protein 0.11 Archaeplastida
AT5G18970 No alias AWPM-19-like family protein 0.11 Archaeplastida
AT5G46530 No alias AWPM-19-like family protein 0.1 Archaeplastida
GSVIVT01017867001 No alias No description available 0.11 Archaeplastida
GSVIVT01031072001 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Gb_35398 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Gb_35411 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os01g14530.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g50440.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_101266g0010 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_10428014g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10428394g0010 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_105516g0020 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_482741g0010 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp3g04500.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp6g01060.1 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Smo37585 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Smo437726 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Solyc01g080290.3.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc02g071310.3.1 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.11 Archaeplastida
Zm00001e018542_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e020052_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e026824_P001 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e028127_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR008390 AWPM-19 11 130
No external refs found!