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  5. LOC_Os04g37920.1

LOC_Os04g37920.1


Description : cryptochrome photoreceptor (CRY)


Gene families : OG0001772 (Archaeplastida) Phylogenetic Tree(s): OG0001772_tree ,
OG_05_0002121 (LandPlants) Phylogenetic Tree(s): OG_05_0002121_tree ,
OG_06_0002814 (SeedPlants) Phylogenetic Tree(s): OG_06_0002814_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g37920.1
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AT4G08920 HY4, ATCRY1,... cryptochrome 1 0.04 Archaeplastida
Cpa|evm.model.tig00021579.19 No alias Cryptochrome-1 OS=Arabidopsis thaliana 0.01 Archaeplastida
Solyc12g057040.2.1 No alias cryptochrome photoreceptor (CRY) 0.04 Archaeplastida
Zm00001e007944_P002 No alias No annotation 0.03 Archaeplastida
Zm00001e022786_P002 No alias cryptochrome photoreceptor (CRY) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
BP GO:0003333 amino acid transmembrane transport IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003951 NAD+ kinase activity IEP Neighborhood
MF GO:0004325 ferrochelatase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0005381 iron ion transmembrane transporter activity IEP Neighborhood
BP GO:0006739 NADP metabolic process IEP Neighborhood
BP GO:0006741 NADP biosynthetic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006783 heme biosynthetic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0034755 iron ion transmembrane transport IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR006050 DNA_photolyase_N 20 178
IPR020978 Cryptochrome_C 525 646
IPR005101 Cryptochr/Photolyase_FAD-bd 298 496
No external refs found!