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  5. LOC_Os04g38640.1

LOC_Os04g38640.1


Description : protease (Deg)


Gene families : OG0000848 (Archaeplastida) Phylogenetic Tree(s): OG0000848_tree ,
OG_05_0008959 (LandPlants) Phylogenetic Tree(s): OG_05_0008959_tree ,
OG_06_0009447 (SeedPlants) Phylogenetic Tree(s): OG_06_0009447_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g38640.1
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00188880 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.05 Archaeplastida
AT4G18370 HHOA, DEG5, DEGP5 DEGP protease 5 0.06 Archaeplastida
AT5G39830 DEGP8, DEG8 Trypsin family protein with PDZ domain 0.04 Archaeplastida
GSVIVT01034494001 No alias Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
Gb_16001 No alias protease (Deg) 0.03 Archaeplastida
Gb_28169 No alias protease (Deg) 0.03 Archaeplastida
Gb_28170 No alias protease (Deg) 0.04 Archaeplastida
Smo176144 No alias Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida
Solyc02g086830.3.1 No alias protease (Deg) 0.02 Archaeplastida
Zm00001e003246_P002 No alias protease (Deg) 0.02 Archaeplastida
Zm00001e007911_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e026566_P003 No alias protease (Deg) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
InterPro domains Description Start Stop
IPR001478 PDZ 360 439
No external refs found!