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  5. LOC_Os04g38810.1

LOC_Os04g38810.1


Description : group-I formin actin filament elongation factor


Gene families : OG0000460 (Archaeplastida) Phylogenetic Tree(s): OG0000460_tree ,
OG_05_0000315 (LandPlants) Phylogenetic Tree(s): OG_05_0000315_tree ,
OG_06_0000245 (SeedPlants) Phylogenetic Tree(s): OG_06_0000245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g38810.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00223690 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.03 Archaeplastida
AT3G25500 AHF1, FH1, AFH1, ATFH1 formin homology 1 0.07 Archaeplastida
GSVIVT01031126001 No alias Cytoskeleton.microfilament network.actin... 0.02 Archaeplastida
LOC_Os09g34180.1 No alias group-I formin actin filament elongation factor 0.05 Archaeplastida
Solyc01g099650.3.1 No alias group-I formin actin filament elongation factor 0.03 Archaeplastida
Solyc02g092470.3.1 No alias group-I formin actin filament elongation factor 0.03 Archaeplastida
Solyc03g044060.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc05g046120.3.1 No alias group-I formin actin filament elongation factor 0.03 Archaeplastida
Solyc12g019480.3.1 No alias group-I formin actin filament elongation factor 0.03 Archaeplastida
Zm00001e010169_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e012597_P001 No alias group-I formin actin filament elongation factor 0.05 Archaeplastida
Zm00001e018960_P001 No alias group-I formin actin filament elongation factor 0.05 Archaeplastida
Zm00001e028560_P002 No alias group-I formin actin filament elongation factor 0.09 Archaeplastida
Zm00001e034711_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e038766_P001 No alias group-I formin actin filament elongation factor 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
InterPro domains Description Start Stop
IPR015425 FH2_Formin 441 808
No external refs found!