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  5. LOC_Os04g39590.1

LOC_Os04g39590.1


Description : fasciclin-type arabinogalactan protein


Gene families : OG0000994 (Archaeplastida) Phylogenetic Tree(s): OG0000994_tree ,
OG_05_0000629 (LandPlants) Phylogenetic Tree(s): OG_05_0000629_tree ,
OG_06_0003305 (SeedPlants) Phylogenetic Tree(s): OG_06_0003305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g39590.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00166710 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
AMTR_s00393p00013250 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
AT1G03870 FLA9 FASCICLIN-like arabinoogalactan 9 0.02 Archaeplastida
AT2G04780 FLA7 FASCICLIN-like arabinoogalactan 7 0.04 Archaeplastida
Gb_02823 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
LOC_Os05g48900.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
MA_7057334g0010 No alias fasciclin-type arabinogalactan protein 0.01 Archaeplastida
Zm00001e024362_P001 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e041064_P001 No alias fasciclin-type arabinogalactan protein 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004512 inositol-3-phosphate synthase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006021 inositol biosynthetic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046165 alcohol biosynthetic process IEP Neighborhood
BP GO:0046173 polyol biosynthetic process IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 59 191
No external refs found!