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  5. LOC_Os04g39680.1

LOC_Os04g39680.1


Description : FT-interacting protein 1 OS=Arabidopsis thaliana (sp|q9fl59|ftip1_arath : 777.0)


Gene families : OG0000149 (Archaeplastida) Phylogenetic Tree(s): OG0000149_tree ,
OG_05_0000184 (LandPlants) Phylogenetic Tree(s): OG_05_0000184_tree ,
OG_06_0000152 (SeedPlants) Phylogenetic Tree(s): OG_06_0000152_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g39680.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00091660 evm_27.TU.AmTr_v1... Protein QUIRKY OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G04150 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.03 Archaeplastida
AT5G17980 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.05 Archaeplastida
Gb_33902 No alias no description available(sp|q60ew9|ftip7_orysj : 1244.0) 0.03 Archaeplastida
LOC_Os02g44490.1 No alias no description available(sp|q9m2r0|ftip3_arath : 717.0) 0.05 Archaeplastida
LOC_Os06g41090.1 No alias no description available(sp|q69t22|ftip1_orysj : 1449.0) 0.03 Archaeplastida
MA_80358g0010 No alias no description available(sp|q60ew9|ftip7_orysj : 423.0) 0.02 Archaeplastida
MA_80358g0020 No alias no description available(sp|q9m2r0|ftip3_arath : 704.0) 0.04 Archaeplastida
Pp3c10_11080V3.1 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.02 Archaeplastida
Solyc01g006620.3.1 No alias no description available(sp|q9m2r0|ftip3_arath : 1132.0) 0.03 Archaeplastida
Solyc01g094410.3.1 No alias no description available(sp|q9m2r0|ftip3_arath : 1084.0) 0.04 Archaeplastida
Solyc03g077920.1.1 No alias FT-interacting protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc03g113190.1.1 No alias Protein QUIRKY OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e007510_P001 No alias no description available(sp|q9m2r0|ftip3_arath : 1014.0) 0.04 Archaeplastida
Zm00001e007829_P001 No alias FT-interacting protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e016221_P001 No alias no description available(sp|q9m2r0|ftip3_arath : 957.0) 0.03 Archaeplastida
Zm00001e023184_P001 No alias no description available(sp|q9m2r0|ftip3_arath : 827.0) 0.03 Archaeplastida
Zm00001e024540_P001 No alias no description available(sp|q60ew9|ftip7_orysj : 170.0) 0.03 Archaeplastida
Zm00001e037594_P001 No alias no description available(sp|q60ew9|ftip7_orysj : 1495.0) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0004126 cytidine deaminase activity IEP Neighborhood
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Neighborhood
BP GO:0006216 cytidine catabolic process IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009164 nucleoside catabolic process IEP Neighborhood
BP GO:0009972 cytidine deamination IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019239 deaminase activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Neighborhood
BP GO:0042454 ribonucleoside catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046087 cytidine metabolic process IEP Neighborhood
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Neighborhood
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1901658 glycosyl compound catabolic process IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013583 PRibTrfase_C 700 855
IPR000008 C2_dom 444 553
IPR000008 C2_dom 267 365
IPR000008 C2_dom 91 201
No external refs found!