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  5. LOC_Os04g40240.1

LOC_Os04g40240.1


Description : no hits & (original description: none)


Gene families : OG0000018 (Archaeplastida) Phylogenetic Tree(s): OG0000018_tree ,
OG_05_0000007 (LandPlants) Phylogenetic Tree(s): OG_05_0000007_tree ,
OG_06_0000001 (SeedPlants) Phylogenetic Tree(s): OG_06_0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g40240.1
Cluster HCCA: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
ChrUn.fgenesh.mRNA.16 No alias no hits & (original description: none) 0.09 Archaeplastida
ChrUn.fgenesh.mRNA.55 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g03590.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os01g18200.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g18550.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g19960.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g20190.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g21490.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g33630.1 No alias no hits & (original description: none) 0.14 Archaeplastida
LOC_Os01g38810.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os01g71910.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os02g15330.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g25560.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os02g51230.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g30080.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os03g31910.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os03g54020.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g03710.1 No alias Subtilisin-like protease SBT3.10 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os04g11410.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g20100.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g20450.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g23280.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g28650.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os04g29900.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g34850.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os04g43590.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os05g03950.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os05g10230.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os05g16580.1 No alias no hits & (original description: none) 0.14 Archaeplastida
LOC_Os05g18990.1 No alias no hits & (original description: none) 0.17 Archaeplastida
LOC_Os05g19700.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os05g26100.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os05g39460.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g39570.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os05g50880.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os06g10380.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g15850.1 No alias Ethylene receptor 4 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os06g16900.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g19310.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os06g21150.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os06g35350.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os06g42580.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g03350.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g03440.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os07g11430.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os07g17510.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g17540.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os07g32750.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g46120.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os08g03730.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g04850.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g04870.1 No alias no hits & (original description: none) 0.13 Archaeplastida
LOC_Os08g08950.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g11300.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g12280.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g17120.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g26280.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os08g34590.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os09g01900.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os09g03040.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os09g09420.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g13660.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os09g14260.1 No alias Glutathione S-transferase T3 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os09g16890.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os09g20130.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os09g25240.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g02010.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g06660.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os10g07554.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os10g07562.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os10g08650.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os10g11230.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os10g19326.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g29010.1 No alias no hits & (original description: none) 0.14 Archaeplastida
LOC_Os10g33480.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g14350.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os11g19550.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os11g23810.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os11g31180.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g35762.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os11g44100.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g45490.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os12g01870.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g05240.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g11600.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os12g13080.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os12g14200.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os12g14650.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os12g14820.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os12g22910.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g23240.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os12g24680.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os12g28740.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g33620.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g36480.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os12g37240.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 375 475
No external refs found!