LOC_Os04g41270.1


Description : no hits & (original description: none)


Gene families : OG0004545 (Archaeplastida) Phylogenetic Tree(s): OG0004545_tree ,
OG_05_0003133 (LandPlants) Phylogenetic Tree(s): OG_05_0003133_tree ,
OG_06_0002027 (SeedPlants) Phylogenetic Tree(s): OG_06_0002027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g41270.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g50800.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os03g02340.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g24630.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g40430.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g46900.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os04g05460.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os06g22990.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g30800.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g42000.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g19630.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os08g36710.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os10g37560.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g14590.1 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!