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  5. AMTR_s00005p00210680

AMTR_s00005p00210680 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00005.88

Description : Ripening-related protein grip22 OS=Vitis vinifera


Gene families : OG0001173 (Archaeplastida) Phylogenetic Tree(s): OG0001173_tree ,
OG_05_0000722 (LandPlants) Phylogenetic Tree(s): OG_05_0000722_tree ,
OG_06_0019528 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00005p00210680
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00196350 evm_27.TU.AmTr_v1... Putative ripening-related protein 2 OS=Oryza sativa... 0.11 Archaeplastida
AMTR_s00002p00197000 evm_27.TU.AmTr_v1... Putative ripening-related protein 1 OS=Oryza sativa... 0.08 Archaeplastida
AMTR_s00005p00207640 evm_27.TU.AmTr_v1... Ripening-related protein grip22 OS=Vitis vinifera 0.06 Archaeplastida
AMTR_s00005p00208720 evm_27.TU.AmTr_v1... Ripening-related protein grip22 OS=Vitis vinifera 0.11 Archaeplastida
LOC_Os04g29550.1 No alias Putative ripening-related protein 1 OS=Oryza sativa... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!