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  5. LOC_Os04g41540.1

LOC_Os04g41540.1


Description : Probable calcium-binding protein CML22 OS=Oryza sativa subsp. japonica (sp|q0jc44|cml22_orysj : 335.0)


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0077746 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0066507 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g41540.1
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00122010 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML35 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00126p00123680 evm_27.TU.AmTr_v1... Calmodulin-like protein 1 OS=Arabidopsis thaliana 0.06 Archaeplastida
AT4G12860 UNE14 EF hand calcium-binding protein family 0.02 Archaeplastida
AT4G14640 AtCML8, CAM8 calmodulin 8 0.02 Archaeplastida
GSVIVT01018070001 No alias Calmodulin-like protein 11 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01021797001 No alias Calmodulin-like protein 11 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01025831001 No alias Calmodulin OS=Lilium longiflorum 0.03 Archaeplastida
Gb_20553 No alias Calmodulin OS=Hordeum vulgare (sp|p62162|calm_horvu : 248.0) 0.02 Archaeplastida
Gb_30178 No alias Calmodulin-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g39380.1 No alias Probable calcium-binding protein CML17 OS=Oryza sativa... 0.03 Archaeplastida
MA_18054g0010 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.03 Archaeplastida
MA_254754g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6883323g0010 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp2g14930.1 No alias Probable calcium-binding protein CML23 OS=Arabidopsis... 0.03 Archaeplastida
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.04 Archaeplastida
Pp3c12_6540V3.1 No alias EF hand calcium-binding protein family 0.04 Archaeplastida
Pp3c14_8590V3.1 No alias calmodulin 5 0.04 Archaeplastida
Pp3c25_10220V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Smo233632 No alias Calmodulin-like protein 7 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc02g067220.4.1 No alias no description available(sp|q93z27|cml46_arath : 83.2) 0.03 Archaeplastida
Solyc07g007950.1.1 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc10g081170.2.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.05 Archaeplastida
Zm00001e012873_P001 No alias DNA repair protein (CEN2). centrin component CEN of... 0.03 Archaeplastida
Zm00001e016987_P001 No alias Probable calcium-binding protein CML16 OS=Oryza sativa... 0.04 Archaeplastida
Zm00001e031053_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 92 154
IPR002048 EF_hand_dom 179 242
No external refs found!