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  5. LOC_Os04g42040.1

LOC_Os04g42040.1


Description : no hits & (original description: none)


Gene families : OG0009699 (Archaeplastida) Phylogenetic Tree(s): OG0009699_tree ,
OG_05_0009402 (LandPlants) Phylogenetic Tree(s): OG_05_0009402_tree ,
OG_06_0006539 (SeedPlants) Phylogenetic Tree(s): OG_06_0006539_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g42040.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00144600 evm_27.TU.AmTr_v1... VAN3-binding protein OS=Arabidopsis thaliana 0.02 Archaeplastida
MA_73121g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e007689_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e041153_P001 No alias no hits & (original description: none) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR008546 DUF828 14 182
No external refs found!