Description : component RPL23a of LSU proteome component
Gene families : OG0002506 (Archaeplastida) Phylogenetic Tree(s): OG0002506_tree ,
OG_05_0002661 (LandPlants) Phylogenetic Tree(s): OG_05_0002661_tree ,
OG_06_0002546 (SeedPlants) Phylogenetic Tree(s): OG_06_0002546_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os04g42270.2 | |
Cluster | HCCA: Cluster_140 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00069970 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.17 | Archaeplastida | |
AMTR_s00029p00132520 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.14 | Archaeplastida | |
AT2G39460 | RPL23A, RPL23AA, ATRPL23A | ribosomal protein L23AA | 0.3 | Archaeplastida | |
AT3G55280 | RPL23AB | ribosomal protein L23AB | 0.18 | Archaeplastida | |
Cpa|evm.model.tig00000037.39 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.27 | Archaeplastida | |
Cre06.g282500 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.21 | Archaeplastida | |
GSVIVT01025041001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | Archaeplastida | |
GSVIVT01025606001 | No alias | 60S ribosomal protein L23a-1 OS=Arabidopsis thaliana | 0.11 | Archaeplastida | |
MA_10430928g0010 | No alias | component RPL23a of LSU proteome component | 0.23 | Archaeplastida | |
MA_10436962g0020 | No alias | component RPL23a of LSU proteome component | 0.03 | Archaeplastida | |
Mp2g00570.1 | No alias | component RPL23a of LSU proteome component | 0.3 | Archaeplastida | |
Pp3c12_19360V3.1 | No alias | ribosomal protein L23AB | 0.18 | Archaeplastida | |
Pp3c13_15920V3.1 | No alias | ribosomal protein L23AB | 0.13 | Archaeplastida | |
Pp3c3_21160V3.1 | No alias | ribosomal protein L23AB | 0.11 | Archaeplastida | |
Pp3c4_8620V3.1 | No alias | ribosomal protein L23AB | 0.21 | Archaeplastida | |
Smo271663 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.15 | Archaeplastida | |
Solyc09g005720.3.1 | No alias | component RPL23a of LSU proteome component | 0.12 | Archaeplastida | |
Solyc10g084610.3.1 | No alias | component RPL23a of LSU proteome component | 0.04 | Archaeplastida | |
Solyc10g086330.2.1 | No alias | component RPL23a of LSU proteome component | 0.18 | Archaeplastida | |
Zm00001e007662_P001 | No alias | component RPL23a of LSU proteome component | 0.16 | Archaeplastida | |
Zm00001e031062_P001 | No alias | component RPL23a of LSU proteome component | 0.11 | Archaeplastida | |
Zm00001e041164_P001 | No alias | component RPL23a of LSU proteome component | 0.33 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
MF | GO:0003924 | GTPase activity | IEP | Neighborhood |
MF | GO:0004019 | adenylosuccinate synthase activity | IEP | Neighborhood |
MF | GO:0005525 | GTP binding | IEP | Neighborhood |
CC | GO:0005759 | mitochondrial matrix | IEP | Neighborhood |
BP | GO:0006414 | translational elongation | IEP | Neighborhood |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Neighborhood |
MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
CC | GO:0043233 | organelle lumen | IEP | Neighborhood |
CC | GO:0070013 | intracellular organelle lumen | IEP | Neighborhood |
No external refs found! |