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  5. LOC_Os04g42840.1

LOC_Os04g42840.1


Description : microtubule orientation regulator (CLASP)


Gene families : OG0001084 (Archaeplastida) Phylogenetic Tree(s): OG0001084_tree ,
OG_05_0002388 (LandPlants) Phylogenetic Tree(s): OG_05_0002388_tree ,
OG_06_0004892 (SeedPlants) Phylogenetic Tree(s): OG_06_0004892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g42840.1
Cluster HCCA: Cluster_359

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00148640 evm_27.TU.AmTr_v1... Cell cycle.cytokinesis.preprophase microtubule... 0.05 Archaeplastida
Cpa|evm.model.tig00000144.157 No alias No description available 0.01 Archaeplastida
GSVIVT01028491001 No alias CLIP-associated protein OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01028493001 No alias Cell cycle.cytokinesis.preprophase microtubule... 0.07 Archaeplastida
GSVIVT01028494001 No alias CLIP-associated protein OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_32967 No alias microtubule orientation regulator (CLASP) 0.04 Archaeplastida
Gb_32968 No alias microtubule orientation regulator (CLASP) 0.03 Archaeplastida
Gb_32969 No alias CLIP-associated protein OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_33941g0020 No alias microtubule orientation regulator (CLASP) 0.04 Archaeplastida
MA_7026974g0010 No alias CLIP-associated protein OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_7498912g0010 No alias CLIP-associated protein OS=Arabidopsis thaliana... 0.05 Archaeplastida
Mp4g01070.1 No alias microtubule orientation regulator (CLASP) 0.04 Archaeplastida
Pp3c24_11460V3.1 No alias CLIP-associated protein 0.04 Archaeplastida
Pp3c8_18290V3.1 No alias CLIP-associated protein 0.02 Archaeplastida
Smo79454 No alias Cell cycle.cytokinesis.preprophase microtubule... 0.02 Archaeplastida
Solyc06g008040.3.1 No alias microtubule orientation regulator (CLASP) 0.04 Archaeplastida
Solyc09g063030.4.1 No alias microtubule orientation regulator (CLASP) 0.02 Archaeplastida
Zm00001e007629_P001 No alias microtubule orientation regulator (CLASP) 0.14 Archaeplastida
Zm00001e041199_P003 No alias microtubule orientation regulator (CLASP) 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0007030 Golgi organization IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051011 microtubule minus-end binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR024395 CLASP_N_dom 287 502
IPR000357 HEAT 162 190
No external refs found!