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  5. LOC_Os04g42880.1

LOC_Os04g42880.1


Description : diphthine amidation accessory protein (DPH7)


Gene families : OG0006381 (Archaeplastida) Phylogenetic Tree(s): OG0006381_tree ,
OG_05_0007865 (LandPlants) Phylogenetic Tree(s): OG_05_0007865_tree ,
OG_06_0007671 (SeedPlants) Phylogenetic Tree(s): OG_06_0007671_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g42880.1

Target Alias Description ECC score Gene Family Method Actions
Smo75309 No alias Protein biosynthesis.translation... 0.02 Archaeplastida
Solyc05g012300.1.1 No alias diphthine amidation accessory protein (DPH7) 0.1 Archaeplastida
Zm00001e041203_P001 No alias diphthine amidation accessory protein (DPH7) 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 211 242
No external refs found!