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Description : phenylalanine ammonia lyase (PAL)
Gene families : OG0000239 (Archaeplastida) Phylogenetic Tree(s): OG0000239_tree ,
OG_05_0000119 (LandPlants) Phylogenetic Tree(s): OG_05_0000119_tree ,
OG_06_0000357 (SeedPlants) Phylogenetic Tree(s): OG_06_0000357_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os04g43760.1 | |
| Cluster | HCCA: Cluster_75 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00201680 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.07 | Archaeplastida | |
| AMTR_s00024p00201930 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | Archaeplastida | |
| AMTR_s00024p00202590 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.02 | Archaeplastida | |
| AMTR_s00032p00159210 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | Archaeplastida | |
| AMTR_s00148p00088930 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | Archaeplastida | |
| AT2G37040 | ATPAL1, PAL1 | PHE ammonia lyase 1 | 0.12 | Archaeplastida | |
| AT3G10340 | PAL4 | phenylalanine ammonia-lyase 4 | 0.04 | Archaeplastida | |
| AT3G53260 | ATPAL2, PAL2 | phenylalanine ammonia-lyase 2 | 0.09 | Archaeplastida | |
| GSVIVT01015138001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.05 | Archaeplastida | |
| GSVIVT01016257001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| GSVIVT01025214001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.07 | Archaeplastida | |
| GSVIVT01025703001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.17 | Archaeplastida | |
| Gb_01672 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Gb_16672 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Gb_21115 | No alias | phenylalanine ammonia lyase (PAL) | 0.06 | Archaeplastida | |
| Gb_31408 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Gb_41796 | No alias | phenylalanine ammonia lyase (PAL) | 0.06 | Archaeplastida | |
| LOC_Os02g41670.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.05 | Archaeplastida | |
| LOC_Os04g43800.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.05 | Archaeplastida | |
| LOC_Os05g35290.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.06 | Archaeplastida | |
| LOC_Os11g48110.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| MA_10429279g0010 | No alias | phenylalanine ammonia lyase (PAL) | 0.05 | Archaeplastida | |
| MA_123220g0010 | No alias | phenylalanine ammonia lyase (PAL) | 0.11 | Archaeplastida | |
| MA_189052g0010 | No alias | Phenylalanine ammonia-lyase OS=Pinus taeda... | 0.04 | Archaeplastida | |
| MA_44561g0010 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| MA_632036g0010 | No alias | no hits & (original description: none) | 0.1 | Archaeplastida | |
| MA_73113g0010 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Mp1g05190.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.05 | Archaeplastida | |
| Mp4g10060.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Mp4g14110.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Mp4g14140.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.09 | Archaeplastida | |
| Mp4g14160.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.07 | Archaeplastida | |
| Mp4g14170.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.06 | Archaeplastida | |
| Pp3c10_21810V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.07 | Archaeplastida | |
| Pp3c13_9000V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.05 | Archaeplastida | |
| Pp3c14_11870V3.1 | No alias | PHE ammonia lyase 1 | 0.07 | Archaeplastida | |
| Pp3c19_13690V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.07 | Archaeplastida | |
| Pp3c1_18830V3.1 | No alias | PHE ammonia lyase 1 | 0.05 | Archaeplastida | |
| Pp3c1_18940V3.1 | No alias | PHE ammonia lyase 1 | 0.05 | Archaeplastida | |
| Pp3c21_7640V3.1 | No alias | phenylalanine ammonia-lyase 2 | 0.03 | Archaeplastida | |
| Pp3c21_7670V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.02 | Archaeplastida | |
| Pp3c21_7680V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.04 | Archaeplastida | |
| Pp3c24_13110V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.03 | Archaeplastida | |
| Pp3c2_30610V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.07 | Archaeplastida | |
| Pp3c2_32410V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.06 | Archaeplastida | |
| Solyc03g078270.2.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Solyc05g056170.3.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.09 | Archaeplastida | |
| Solyc09g007910.4.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Solyc09g007920.4.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Solyc10g011925.1.1 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
| Solyc10g086180.2.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.05 | Archaeplastida | |
| Zm00001e005064_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Zm00001e007572_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.05 | Archaeplastida | |
| Zm00001e015155_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.08 | Archaeplastida | |
| Zm00001e015157_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Zm00001e023031_P002 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Zm00001e023032_P002 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Zm00001e023033_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.07 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | Neighborhood |
| MF | GO:0003871 | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Neighborhood |
| MF | GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity | IEP | Neighborhood |
| MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006555 | methionine metabolic process | IEP | Neighborhood |
| BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Neighborhood |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008171 | O-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008172 | S-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Neighborhood |
| MF | GO:0008483 | transaminase activity | IEP | Neighborhood |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Neighborhood |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Neighborhood |
| BP | GO:0009086 | methionine biosynthetic process | IEP | Neighborhood |
| BP | GO:0009250 | glucan biosynthetic process | IEP | Neighborhood |
| MF | GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | IEP | Neighborhood |
| MF | GO:0015020 | glucuronosyltransferase activity | IEP | Neighborhood |
| CC | GO:0016020 | membrane | IEP | Neighborhood |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Neighborhood |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Neighborhood |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Neighborhood |
| MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Neighborhood |
| MF | GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | IEP | Neighborhood |
| MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Neighborhood |
| MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Neighborhood |
| MF | GO:0016759 | cellulose synthase activity | IEP | Neighborhood |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Neighborhood |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Neighborhood |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| MF | GO:0020037 | heme binding | IEP | Neighborhood |
| BP | GO:0030243 | cellulose metabolic process | IEP | Neighborhood |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | Neighborhood |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Neighborhood |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Neighborhood |
| MF | GO:0042085 | 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| BP | GO:0044042 | glucan metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Neighborhood |
| MF | GO:0046527 | glucosyltransferase activity | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| MF | GO:0046983 | protein dimerization activity | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| MF | GO:0051087 | chaperone binding | IEP | Neighborhood |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | Neighborhood |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Neighborhood |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001106 | Aromatic_Lyase | 55 | 530 |
| No external refs found! |