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  5. AMTR_s00005p00232410

AMTR_s00005p00232410 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00005.114

No description available


Gene families : OG0007066 (Archaeplastida) Phylogenetic Tree(s): OG0007066_tree ,
OG_05_0006004 (LandPlants) Phylogenetic Tree(s): OG_05_0006004_tree ,
OG_06_0005236 (SeedPlants) Phylogenetic Tree(s): OG_06_0005236_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00005p00232410
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Mp2g25620.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e007735_P004 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 560 635
IPR020683 Ankyrin_rpt-contain_dom 90 147
IPR020683 Ankyrin_rpt-contain_dom 445 518
IPR020683 Ankyrin_rpt-contain_dom 325 413
No external refs found!