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  5. LOC_Os04g44700.1

LOC_Os04g44700.1


Description : COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana (sp|q9m2z2|wdr5a_arath : 83.2)


Gene families : OG0000619 (Archaeplastida) Phylogenetic Tree(s): OG0000619_tree ,
OG_05_0000400 (LandPlants) Phylogenetic Tree(s): OG_05_0000400_tree ,
OG_06_0000268 (SeedPlants) Phylogenetic Tree(s): OG_06_0000268_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g44700.1
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00138110 evm_27.TU.AmTr_v1... COMPASS-like H3K4 histone methylase component WDR5B... 0.03 Archaeplastida
MA_18161g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_470860g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c10_15710V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Zm00001e008164_P002 No alias no hits & (original description: none) 0.12 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 444 481
IPR001680 WD40_repeat 300 330
IPR001680 WD40_repeat 403 438
No external refs found!