- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Expansin-B17 OS=Oryza sativa subsp. japonica (sp|q7x6j9|exb17_orysj : 268.0)
Gene families : OG0000383 (Archaeplastida) Phylogenetic Tree(s): OG0000383_tree ,
OG_05_0000369 (LandPlants) Phylogenetic Tree(s): OG_05_0000369_tree ,
OG_06_0066613 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os04g44780.1 | |
| Cluster | HCCA: Cluster_235 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00266410 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.expansins.beta-type expansin | 0.03 | Archaeplastida | |
| AMTR_s00111p00059150 | evm_27.TU.AmTr_v1... | Putative expansin-B2 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
| AT2G20750 | EXPB1, ATEXPB1,... | expansin B1 | 0.05 | Archaeplastida | |
| Gb_19114 | No alias | beta-like-class expansin | 0.03 | Archaeplastida | |
| LOC_Os02g44108.1 | No alias | Expansin-B11 OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
| LOC_Os03g01610.1 | No alias | Expansin-B1 OS=Oryza sativa subsp. japonica... | 0.04 | Archaeplastida | |
| LOC_Os03g01640.1 | No alias | Expansin-B10 OS=Oryza sativa subsp. japonica... | 0.04 | Archaeplastida | |
| LOC_Os03g01650.1 | No alias | Expansin-B1 OS=Oryza sativa subsp. japonica... | 0.04 | Archaeplastida | |
| LOC_Os10g40700.1 | No alias | Expansin-B6 OS=Oryza sativa subsp. japonica... | 0.05 | Archaeplastida | |
| LOC_Os10g40720.1 | No alias | Expansin-B3 OS=Oryza sativa subsp. japonica... | 0.02 | Archaeplastida | |
| MA_10313796g0010 | No alias | Expansin-B16 OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
| MA_10427897g0010 | No alias | beta-class expansin | 0.02 | Archaeplastida | |
| MA_166764g0010 | No alias | Expansin-B17 OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
| MA_7765271g0010 | No alias | No annotation | 0.03 | Archaeplastida | |
| MA_78155g0010 | No alias | Expansin-B17 OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
| Pp3c1_37980V3.1 | No alias | expansin B3 | 0.04 | Archaeplastida | |
| Pp3c22_17770V3.1 | No alias | expansin B3 | 0.02 | Archaeplastida | |
| Pp3c22_630V3.1 | No alias | expansin B3 | 0.02 | Archaeplastida | |
| Solyc01g090820.2.1 | No alias | Putative expansin-B14 OS=Oryza sativa subsp. japonica... | 0.04 | Archaeplastida | |
| Solyc07g054170.3.1 | No alias | beta-class expansin | 0.02 | Archaeplastida | |
| Solyc10g008440.3.1 | No alias | beta-class expansin | 0.05 | Archaeplastida | |
| Zm00001e000036_P001 | No alias | Expansin-B4 OS=Oryza sativa subsp. japonica... | 0.06 | Archaeplastida | |
| Zm00001e000038_P001 | No alias | Expansin-B7 OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
| Zm00001e005019_P001 | No alias | Expansin-B12 OS=Oryza sativa subsp. japonica... | 0.04 | Archaeplastida | |
| Zm00001e007438_P001 | No alias | beta-class expansin | 0.05 | Archaeplastida | |
| Zm00001e015230_P001 | No alias | beta-class expansin | 0.02 | Archaeplastida | |
| Zm00001e015336_P002 | No alias | Expansin-B11 OS=Oryza sativa subsp. japonica... | 0.02 | Archaeplastida | |
| Zm00001e015337_P001 | No alias | Expansin-B11 OS=Oryza sativa subsp. japonica... | 0.02 | Archaeplastida | |
| Zm00001e023169_P003 | No alias | Putative expansin-B14 OS=Oryza sativa subsp. japonica... | 0.02 | Archaeplastida | |
| Zm00001e033407_P001 | No alias | Expansin-B11 OS=Oryza sativa subsp. japonica... | 0.06 | Archaeplastida | |
| Zm00001e036907_P001 | No alias | Putative expansin-B14 OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
| Zm00001e037879_P001 | No alias | Expansin-B3 OS=Oryza sativa subsp. japonica... | 0.05 | Archaeplastida | |
| Zm00001e037881_P001 | No alias | Expansin-B2 OS=Oryza sativa subsp. japonica... | 0.04 | Archaeplastida | |
| Zm00001e037884_P001 | No alias | Expansin-B6 OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
| Zm00001e037885_P001 | No alias | Expansin-B6 OS=Oryza sativa subsp. japonica... | 0.04 | Archaeplastida | |
| Zm00001e037914_P002 | No alias | Expansin-B9 OS=Zea mays (sp|q07154|expb9_maize : 487.0) | 0.02 | Archaeplastida | |
| Zm00001e041519_P002 | No alias | Expansin-B5 OS=Oryza sativa subsp. japonica... | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005088 | Ras guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005089 | Rho guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| MF | GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| MF | GO:0008417 | fucosyltransferase activity | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| MF | GO:0017016 | Ras GTPase binding | IEP | Neighborhood |
| MF | GO:0017048 | Rho GTPase binding | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| MF | GO:0031127 | alpha-(1,2)-fucosyltransferase activity | IEP | Neighborhood |
| MF | GO:0031267 | small GTPase binding | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0042546 | cell wall biogenesis | IEP | Neighborhood |
| MF | GO:0046983 | protein dimerization activity | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| MF | GO:0051020 | GTPase binding | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009009 | RlpA-like_DPBB | 87 | 153 |
| No external refs found! |