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  5. LOC_Os04g45060.1

LOC_Os04g45060.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0002418 (SeedPlants) Phylogenetic Tree(s): OG_06_0002418_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g45060.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00224470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00024p00225650 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00032p00057800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00032p00221670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00048p00210040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00049p00074250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.04 Archaeplastida
AT1G66230 AtMYB20, MYB20 myb domain protein 20 0.05 Archaeplastida
AT3G01140 MYB106, NOK, AtMYB106 myb domain protein 106 0.03 Archaeplastida
AT3G29020 MYB110, AtMYB110 myb domain protein 110 0.03 Archaeplastida
AT3G46130 ATMYB48-1,... myb domain protein 48 0.03 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.02 Archaeplastida
AT3G61250 AtMYB17, MYB17 myb domain protein 17 0.03 Archaeplastida
AT4G05100 AtMYB74, MYB74 myb domain protein 74 0.03 Archaeplastida
AT4G21440 ATMYB102, ATM4, MYB102 MYB-like 102 0.02 Archaeplastida
AT5G15310 ATMIXTA, MYB16, ATMYB16 myb domain protein 16 0.03 Archaeplastida
GSVIVT01008090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01011436001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01014770001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01026868001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01028981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01029904001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01032564001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01035332001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_00379 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_02422 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_22927 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_34882 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g50720.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g04900.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g15020.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os08g33660.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os08g33800.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os11g10130.1 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10157944g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_101790g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_137453g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_137934g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_179894g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_214345g0020 No alias transcription factor (MYB) 0.07 Archaeplastida
MA_223201g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_2797g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_55123g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_83918g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_89624g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_9483804g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp2g22560.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Smo100734 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Smo39499 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc02g079280.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g113530.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g121740.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g014470.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc06g009710.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g073640.4.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc10g005760.3.1 No alias transcription factor (MYB). transcriptional key... 0.02 Archaeplastida
Solyc12g008670.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc12g099140.2.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e004140_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e007904_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e009262_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e014925_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e022450_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e026250_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e037956_P001 No alias transcription factor (MYB) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 110
IPR001005 SANT/Myb 14 61
No external refs found!