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  5. LOC_Os04g45460.1

LOC_Os04g45460.1


Description : plasmodesmal protein (PDLP)


Gene families : OG0001569 (Archaeplastida) Phylogenetic Tree(s): OG0001569_tree ,
OG_05_0001082 (LandPlants) Phylogenetic Tree(s): OG_05_0001082_tree ,
OG_06_0001317 (SeedPlants) Phylogenetic Tree(s): OG_06_0001317_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g45460.1
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00153490 evm_27.TU.AmTr_v1... Cysteine-rich repeat secretory protein 60 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00011p00250000 evm_27.TU.AmTr_v1... Cysteine-rich repeat secretory protein 15 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G70690 PDLP5, HWI1 Receptor-like protein kinase-related family protein 0.08 Archaeplastida
AT2G01660 PDLP6 plasmodesmata-located protein 6 0.03 Archaeplastida
AT3G04370 PDLP4 plasmodesmata-located protein 4 0.04 Archaeplastida
AT5G37660 PDLP7 plasmodesmata-located protein 7 0.07 Archaeplastida
LOC_Os02g50200.1 No alias plasmodesmal protein (PDLP) 0.03 Archaeplastida
MA_18855g0010 No alias Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.03 Archaeplastida
MA_18855g0020 No alias Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.04 Archaeplastida
Solyc05g055930.2.1 No alias plasmodesmal protein (PDLP) 0.03 Archaeplastida
Solyc09g090680.3.1 No alias plasmodesmal protein (PDLP) 0.02 Archaeplastida
Zm00001e007407_P002 No alias plasmodesmal protein (PDLP) 0.06 Archaeplastida
Zm00001e023117_P001 No alias plasmodesmal protein (PDLP) 0.03 Archaeplastida
Zm00001e030966_P001 No alias plasmodesmal protein (PDLP) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002902 GNK2 146 230
IPR002902 GNK2 34 130
No external refs found!