1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g45750.1

LOC_Os04g45750.1


Description : transcription factor (Trihelix)


Gene families : OG0000662 (Archaeplastida) Phylogenetic Tree(s): OG0000662_tree ,
OG_05_0000467 (LandPlants) Phylogenetic Tree(s): OG_05_0000467_tree ,
OG_06_0000568 (SeedPlants) Phylogenetic Tree(s): OG_06_0000568_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g45750.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00147950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.04 Archaeplastida
AT1G33240 AT-GTL1, GTL1, AT-GTL2 GT-2-like 1 0.13 Archaeplastida
AT1G76880 No alias Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
AT1G76890 AT-GT2, GT2 No description available 0.06 Archaeplastida
AT3G10000 EDA31 Homeodomain-like superfamily protein 0.02 Archaeplastida
AT5G03680 PTL Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
GSVIVT01019722001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.05 Archaeplastida
GSVIVT01033792001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.06 Archaeplastida
GSVIVT01034523001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.02 Archaeplastida
GSVIVT01034705001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.04 Archaeplastida
Gb_02053 No alias transcription factor (Trihelix) 0.02 Archaeplastida
LOC_Os02g01380.1 No alias transcription factor (Trihelix) 0.04 Archaeplastida
LOC_Os10g37240.4 No alias Trihelix transcription factor GT-2 OS=Arabidopsis... 0.05 Archaeplastida
MA_10427500g0020 No alias transcription factor (Trihelix) 0.04 Archaeplastida
MA_10427500g0030 No alias Trihelix transcription factor GTL1 OS=Arabidopsis... 0.04 Archaeplastida
MA_10433499g0020 No alias transcription factor (Trihelix) 0.06 Archaeplastida
MA_47951g0010 No alias transcription factor (Trihelix) 0.07 Archaeplastida
MA_79619g0010 No alias transcription factor (Trihelix) 0.02 Archaeplastida
Pp3c18_11190V3.1 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
Smo85122 No alias Trihelix transcription factor GT-2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc09g009250.3.1 No alias transcription factor (Trihelix) 0.05 Archaeplastida
Zm00001e000092_P003 No alias transcription factor (Trihelix) 0.06 Archaeplastida
Zm00001e004364_P002 No alias transcription factor (Trihelix) 0.08 Archaeplastida
Zm00001e007383_P001 No alias transcription factor (Trihelix) 0.07 Archaeplastida
Zm00001e012540_P001 No alias transcription factor (Trihelix) 0.1 Archaeplastida
Zm00001e013403_P003 No alias transcription factor (Trihelix) 0.05 Archaeplastida
Zm00001e025402_P001 No alias transcription factor (Trihelix) 0.02 Archaeplastida
Zm00001e041338_P003 No alias transcription factor (Trihelix) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
BP GO:0052646 alditol phosphate metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!