LOC_Os04g45834.1


Description : no hits & (original description: none)


Gene families : OG0000280 (Archaeplastida) Phylogenetic Tree(s): OG0000280_tree ,
OG_05_0018073 (LandPlants) Phylogenetic Tree(s): OG_05_0018073_tree ,
OG_06_0017658 (SeedPlants) Phylogenetic Tree(s): OG_06_0017658_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g45834.1
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00028850 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G11700 No alias Protein of unknown function, DUF584 0.02 Archaeplastida
AT2G28400 No alias Protein of unknown function, DUF584 0.04 Archaeplastida
AT3G45210 No alias Protein of unknown function, DUF584 0.03 Archaeplastida
AT5G60680 No alias Protein of unknown function, DUF584 0.04 Archaeplastida
GSVIVT01038612001 No alias No description available 0.03 Archaeplastida
LOC_Os04g33760.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g33270.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g27350.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g33990.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_2588g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_441447g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_5080831g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_78373g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Smo413288 No alias No description available 0.03 Archaeplastida
Solyc02g032800.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g080510.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e007379_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e010473_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e012668_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e015167_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e041345_P001 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 35 208
No external refs found!