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  5. LOC_Os04g45900.1

LOC_Os04g45900.1


Description : iron chelator transporter (YSL). ferric cation-chelator transporter (YSL)


Gene families : OG0000193 (Archaeplastida) Phylogenetic Tree(s): OG0000193_tree ,
OG_05_0000331 (LandPlants) Phylogenetic Tree(s): OG_05_0000331_tree ,
OG_06_0001892 (SeedPlants) Phylogenetic Tree(s): OG_06_0001892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g45900.1
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00088380 evm_27.TU.AmTr_v1... Probable metal-nicotianamine transporter YSL5... 0.03 Archaeplastida
AMTR_s00029p00088690 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.03 Archaeplastida
AMTR_s00103p00133280 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.05 Archaeplastida
AMTR_s00103p00133560 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.05 Archaeplastida
AMTR_s00154p00064550 evm_27.TU.AmTr_v1... Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.04 Archaeplastida
AT5G53550 ATYSL3, YSL3 YELLOW STRIPE like 3 0.03 Archaeplastida
GSVIVT01012035001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.03 Archaeplastida
GSVIVT01019646001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.02 Archaeplastida
GSVIVT01029349001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.06 Archaeplastida
Gb_41263 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.04 Archaeplastida
MA_10431747g0010 No alias Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.03 Archaeplastida
MA_7826635g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c1_9680V3.1 No alias YELLOW STRIPE like 6 0.03 Archaeplastida
Pp3c7_20710V3.1 No alias YELLOW STRIPE like 6 0.03 Archaeplastida
Solyc03g031920.3.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.08 Archaeplastida
Solyc08g083060.3.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
Zm00001e007544_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.07 Archaeplastida
Zm00001e008357_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.05 Archaeplastida
Zm00001e041266_P002 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.04 Archaeplastida
Zm00001e041350_P003 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.06 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004813 OPT 45 658
No external refs found!