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  5. AMTR_s00005p00240090

AMTR_s00005p00240090 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00005.128

Description : AT-hook motif nuclear-localized protein 14 OS=Arabidopsis thaliana


Gene families : OG0000405 (Archaeplastida) Phylogenetic Tree(s): OG0000405_tree ,
OG_05_0000251 (LandPlants) Phylogenetic Tree(s): OG_05_0000251_tree ,
OG_06_0014954 (SeedPlants) Phylogenetic Tree(s): OG_06_0014954_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00005p00240090
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
Gb_40521 No alias AT-hook motif nuclear-localized protein 10... 0.05 Archaeplastida
LOC_Os06g22030.1 No alias AT-hook motif nuclear-localized protein 10... 0.03 Archaeplastida
Solyc08g077030.4.1 No alias AT-hook motif nuclear-localized protein 10... 0.05 Archaeplastida
Zm00001e010074_P004 No alias AT-hook motif nuclear-localized protein 10... 0.04 Archaeplastida
Zm00001e021831_P002 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e024390_P002 No alias AT-hook motif nuclear-localized protein 10... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR005175 PPC_dom 117 233
No external refs found!