LOC_Os04g46660.1

Description : cyclin (CYCP)

Gene families : OG0000557 (Archaeplastida) Phylogenetic Tree(s): OG0000557_tree ,
OG_05_0000387 (LandPlants) Phylogenetic Tree(s): OG_05_0000387_tree ,
OG_06_0000251 (SeedPlants) Phylogenetic Tree(s): OG_06_0000251_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g46660.1
Cluster	HCCA: Cluster_201

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00190080	evm_27.TU.AmTr_v1...	Cell cycle.regulation.cyclins.CYCP-type cyclin	0.02	Archaeplastida
AMTR_s00043p00103760	evm_27.TU.AmTr_v1...	Cell cycle.regulation.cyclins.CYCP-type cyclin	0.02	Archaeplastida
AT2G44740	CYCP4;1	cyclin p4;1	0.02	Archaeplastida
AT3G60550	CYCP3;2	cyclin p3;2	0.02	Archaeplastida
AT3G63120	CYCP1;1	cyclin p1;1	0.06	Archaeplastida
AT5G07450	CYCP4;3	cyclin p4;3	0.05	Archaeplastida
AT5G61650	CYCP4;2, CYCP4	CYCLIN P4;2	0.04	Archaeplastida
Gb_06914	No alias	cyclin (CYCP)	0.03	Archaeplastida
Gb_27229	No alias	cyclin (CYCP)	0.02	Archaeplastida
LOC_Os02g03294.1	No alias	cyclin (CYCP)	0.06	Archaeplastida
MA_57087g0010	No alias	cyclin (CYCP)	0.05	Archaeplastida
MA_80306g0010	No alias	cyclin (CYCP)	0.03	Archaeplastida
MA_8772g0010	No alias	cyclin (CYCP)	0.03	Archaeplastida
Solyc03g093790.3.1	No alias	cyclin (CYCP)	0.04	Archaeplastida
Zm00001e007314_P001	No alias	cyclin (CYCP)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEA	Interproscan
BP	GO:0001932	regulation of protein phosphorylation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	None	Extended
MF	GO:0019901	protein kinase binding	IEA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0032268	regulation of cellular protein metabolic process	None	Extended
BP	GO:0042325	regulation of phosphorylation	None	Extended
BP	GO:0043549	regulation of kinase activity	None	Extended
BP	GO:0045859	regulation of protein kinase activity	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051338	regulation of transferase activity	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071900	regulation of protein serine/threonine kinase activity	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0004427	inorganic diphosphatase activity	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
BP	GO:0009250	glucan biosynthetic process	IEP	Neighborhood
MF	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	IEP	Neighborhood
MF	GO:0015020	glucuronosyltransferase activity	IEP	Neighborhood
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0016759	cellulose synthase activity	IEP	Neighborhood
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Neighborhood
BP	GO:0030243	cellulose metabolic process	IEP	Neighborhood
BP	GO:0030244	cellulose biosynthetic process	IEP	Neighborhood
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0051273	beta-glucan metabolic process	IEP	Neighborhood
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013922	Cyclin_PHO80-like	55	164

External Links

No external refs found!

LOC_Os04g46660.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation