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  5. LOC_Os04g46940.1

LOC_Os04g46940.1


Description : P1B-type heavy metal cation-transporting ATPase (HMA)


Gene families : OG0000650 (Archaeplastida) Phylogenetic Tree(s): OG0000650_tree ,
OG_05_0000591 (LandPlants) Phylogenetic Tree(s): OG_05_0000591_tree ,
OG_06_0001710 (SeedPlants) Phylogenetic Tree(s): OG_06_0001710_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g46940.1
Cluster HCCA: Cluster_529

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00241570 evm_27.TU.AmTr_v1... Solute transport.primary active transport.P-type ATPase... 0.03 Archaeplastida
AT5G44790 RAN1, HMA7 copper-exporting ATPase / responsive-to-antagonist 1 /... 0.03 Archaeplastida
GSVIVT01019769001 No alias Solute transport.primary active transport.P-type ATPase... 0.04 Archaeplastida
Smo231359 No alias Solute transport.primary active transport.P-type ATPase... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR006121 HMA_dom 78 139
IPR006121 HMA_dom 246 289
IPR006121 HMA_dom 157 217
No external refs found!