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  5. LOC_Os04g47220.1

LOC_Os04g47220.1


Description : plasma membrane intrinsic protein (PIP)


Gene families : OG0000026 (Archaeplastida) Phylogenetic Tree(s): OG0000026_tree ,
OG_05_0002037 (LandPlants) Phylogenetic Tree(s): OG_05_0002037_tree ,
OG_06_0001854 (SeedPlants) Phylogenetic Tree(s): OG_06_0001854_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g47220.1
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00081940 evm_27.TU.AmTr_v1... Solute transport.channels.MIP family.Nodulin-26-like... 0.03 Archaeplastida
AMTR_s00009p00231200 evm_27.TU.AmTr_v1... Solute transport.channels.MIP family.plasma membrane... 0.03 Archaeplastida
AMTR_s00152p00041700 evm_27.TU.AmTr_v1... Solute transport.channels.MIP family.plasma membrane... 0.02 Archaeplastida
AT1G01620 PIP1C, TMP-B, PIP1;3 plasma membrane intrinsic protein 1C 0.03 Archaeplastida
AT2G37170 PIP2B, PIP2;2 plasma membrane intrinsic protein 2 0.03 Archaeplastida
AT3G26520 TIP1;2, TIP2,... tonoplast intrinsic protein 2 0.03 Archaeplastida
AT3G61430 PIP1A, PIP1;1,... plasma membrane intrinsic protein 1A 0.04 Archaeplastida
AT4G17340 DELTA-TIP2, TIP2;2 tonoplast intrinsic protein 2;2 0.05 Archaeplastida
AT5G47450 DELTA-TIP3,... tonoplast intrinsic protein 2;3 0.04 Archaeplastida
AT5G60660 PIP2;4, PIP2F plasma membrane intrinsic protein 2;4 0.03 Archaeplastida
GSVIVT01018189001 No alias Solute transport.channels.MIP family.tonoplast intrinsic... 0.02 Archaeplastida
GSVIVT01018678001 No alias Solute transport.channels.MIP family.tonoplast intrinsic... 0.02 Archaeplastida
GSVIVT01019743001 No alias Solute transport.channels.MIP family.plasma membrane... 0.03 Archaeplastida
GSVIVT01032861001 No alias Solute transport.channels.MIP family.plasma membrane... 0.02 Archaeplastida
Gb_02400 No alias tonoplast intrinsic protein (TIP) 0.02 Archaeplastida
LOC_Os08g05590.1 No alias Nodulin-26-like intrinsic protein (NIP) 0.03 Archaeplastida
MA_101877g0010 No alias Nodulin-26-like intrinsic protein (NIP) 0.03 Archaeplastida
MA_10426909g0020 No alias plasma membrane intrinsic protein (PIP) 0.02 Archaeplastida
MA_93825g0010 No alias Nodulin-26-like intrinsic protein (NIP) 0.03 Archaeplastida
Pp3c13_18810V3.1 No alias plasma membrane intrinsic protein 1B 0.02 Archaeplastida
Pp3c18_2300V3.1 No alias plasma membrane intrinsic protein 2;8 0.02 Archaeplastida
Pp3c2_34410V3.1 No alias NOD26-like intrinsic protein 6;1 0.03 Archaeplastida
Solyc01g079890.3.1 No alias Nodulin-26-like intrinsic protein (NIP) 0.02 Archaeplastida
Solyc01g111660.4.1 No alias plasma membrane intrinsic protein (PIP) 0.03 Archaeplastida
Solyc03g013340.3.1 No alias Nodulin-26-like intrinsic protein (NIP) 0.04 Archaeplastida
Solyc03g117050.4.1 No alias Nodulin-26-like intrinsic protein (NIP) 0.04 Archaeplastida
Solyc06g074820.3.1 No alias tonoplast intrinsic protein (TIP) 0.04 Archaeplastida
Zm00001e004371_P001 No alias Nodulin-26-like intrinsic protein (NIP) 0.05 Archaeplastida
Zm00001e012616_P002 No alias tonoplast intrinsic protein (TIP) 0.02 Archaeplastida
Zm00001e015814_P001 No alias Nodulin-26-like intrinsic protein (NIP) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
InterPro domains Description Start Stop
IPR000425 MIP 46 275
No external refs found!