LOC_Os04g48310.1


Description : RING-H2 finger protein ATL48 OS=Arabidopsis thaliana (sp|q7x843|atl48_arath : 82.0)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0003924 (LandPlants) Phylogenetic Tree(s): OG_05_0003924_tree ,
OG_06_0005596 (SeedPlants) Phylogenetic Tree(s): OG_06_0005596_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g48310.1
Cluster HCCA: Cluster_332

Target Alias Description ECC score Gene Family Method Actions
AT4G30400 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Gb_04643 No alias RING-H2 finger protein ATL60 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_184439g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc07g045190.3.1 No alias ubiquitin protein ligase (XERICO) 0.08 Archaeplastida
Zm00001e016092_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e030872_P001 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 95 138
No external refs found!