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  5. LOC_Os04g48830.1

LOC_Os04g48830.1


Description : transcription factor (OFP)


Gene families : OG0000130 (Archaeplastida) Phylogenetic Tree(s): OG0000130_tree ,
OG_05_0000050 (LandPlants) Phylogenetic Tree(s): OG_05_0000050_tree ,
OG_06_0000120 (SeedPlants) Phylogenetic Tree(s): OG_06_0000120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g48830.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00189070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.02 Archaeplastida
AMTR_s00103p00131630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.03 Archaeplastida
AT1G06920 OFP4, ATOFP4 ovate family protein 4 0.03 Archaeplastida
AT2G18500 ATOFP7, OFP7 ovate family protein 7 0.03 Archaeplastida
AT2G36026 No alias Ovate family protein 0.03 Archaeplastida
AT3G52525 ATOFP6, OFP6 ovate family protein 6 0.03 Archaeplastida
AT4G04025 No alias No description available 0.03 Archaeplastida
AT4G18830 ATOFP5, OFP5 ovate family protein 5 0.03 Archaeplastida
AT5G58360 ATOFP3, OFP3 ovate family protein 3 0.03 Archaeplastida
GSVIVT01017105001 No alias RNA biosynthesis.transcriptional activation.OFP... 0.04 Archaeplastida
LOC_Os01g64430.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os03g06350.1 No alias transcription factor (OFP) 0.05 Archaeplastida
LOC_Os03g21870.1 No alias transcription factor (OFP) 0.05 Archaeplastida
LOC_Os04g37510.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os04g58820.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os05g12808.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os05g25910.1 No alias transcription factor (OFP) 0.04 Archaeplastida
LOC_Os05g36990.1 No alias transcription factor (OFP) 0.04 Archaeplastida
LOC_Os12g06150.1 No alias transcription factor (OFP) 0.03 Archaeplastida
MA_10434319g0010 No alias transcription factor (OFP) 0.04 Archaeplastida
MA_61037g0010 No alias transcription factor (OFP) 0.03 Archaeplastida
Mp3g18940.1 No alias transcription factor (OFP) 0.03 Archaeplastida
Pp3c1_110V3.1 No alias ovate family protein 8 0.02 Archaeplastida
Solyc02g085500.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc03g034100.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g082460.1.1 No alias transcription factor (OFP) 0.04 Archaeplastida
Solyc09g018200.1.1 No alias transcription factor (OFP) 0.04 Archaeplastida
Solyc09g082080.1.1 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e000779_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e001591_P001 No alias transcription factor (OFP) 0.07 Archaeplastida
Zm00001e007176_P001 No alias transcription factor (OFP) 0.06 Archaeplastida
Zm00001e009107_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
Zm00001e009109_P001 No alias transcription factor (OFP) 0.05 Archaeplastida
Zm00001e010976_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
Zm00001e016408_P001 No alias transcription factor (OFP) 0.06 Archaeplastida
Zm00001e019184_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
Zm00001e019825_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
Zm00001e024173_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
Zm00001e031752_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e031917_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e033910_P001 No alias transcription factor (OFP) 0.06 Archaeplastida
Zm00001e035852_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
Zm00001e039401_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e041973_P001 No alias transcription factor (OFP) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006458 Ovate_C 278 334
No external refs found!