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  5. LOC_Os04g49310.1

LOC_Os04g49310.1


Description : Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana (sp|b6sfa4|maa3_arath : 106.0)


Gene families : OG0001714 (Archaeplastida) Phylogenetic Tree(s): OG0001714_tree ,
OG_05_0001029 (LandPlants) Phylogenetic Tree(s): OG_05_0001029_tree ,
OG_06_0001106 (SeedPlants) Phylogenetic Tree(s): OG_06_0001106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g49310.1
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AT1G65810 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 Archaeplastida
AT5G37030 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 Archaeplastida
AT5G37140 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 Archaeplastida
AT5G37150 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
AT5G37165 No alias No description available 0.06 Archaeplastida
LOC_Os02g45910.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e007146_P001 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e034966_P001 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Zm00001e041374_P001 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!