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  5. LOC_Os04g50680.1

LOC_Os04g50680.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000006 (SeedPlants) Phylogenetic Tree(s): OG_06_0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g50680.1
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00006p00267240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00022p00252530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00024p00224850 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00133p00071910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00145p00098450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT1G16490 MYB58, ATMYB58 myb domain protein 58 0.03 Archaeplastida
AT1G18570 AtMYB51, BW51B,... myb domain protein 51 0.02 Archaeplastida
AT1G22640 MYB3, ATMYB3 myb domain protein 3 0.03 Archaeplastida
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.04 Archaeplastida
AT1G35515 MYB8, HOS10 high response to osmotic stress 10 0.02 Archaeplastida
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.02 Archaeplastida
AT1G69560 LOF2, MYB105, ATMYB105 myb domain protein 105 0.02 Archaeplastida
AT1G73410 MYB54, ATMYB54 myb domain protein 54 0.03 Archaeplastida
AT1G74080 ATMYB122, MYB122 myb domain protein 122 0.03 Archaeplastida
AT1G74650 ATMYB31, MYB31, ATY13 myb domain protein 31 0.03 Archaeplastida
AT2G47460 ATMYB12, PFG1, MYB12 myb domain protein 12 0.02 Archaeplastida
AT3G02940 AtMYB107, MYB107 myb domain protein 107 0.03 Archaeplastida
AT3G12720 ATY53, ATMYB67, MYB67 myb domain protein 67 0.03 Archaeplastida
AT3G18100 MYB4R1, AtMYB4R1 myb domain protein 4r1 0.03 Archaeplastida
AT3G48920 MYB45, AtMYB45 myb domain protein 45 0.03 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.03 Archaeplastida
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.03 Archaeplastida
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.04 Archaeplastida
AT4G21440 ATMYB102, ATM4, MYB102 MYB-like 102 0.03 Archaeplastida
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.02 Archaeplastida
AT5G52260 MYB19, AtMYB19 myb domain protein 19 0.05 Archaeplastida
AT5G59780 ATMYB59-1,... myb domain protein 59 0.03 Archaeplastida
AT5G62320 ATMYB99, ATMYBCU15, MYB99 myb domain protein 99 0.02 Archaeplastida
Cpa|evm.model.tig00000663.2 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Cre16.g677382 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01000450001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01003662001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01008005001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01014454001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01015264001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01025034001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028171001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01028328001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01029904001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01032564001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01034943001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01035332001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01036712001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_02419 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_02422 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_13117 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_19333 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_22884 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_29520 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_34464 No alias Transcription factor GAMYB OS=Oryza sativa subsp.... 0.03 Archaeplastida
Gb_35820 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_36145 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_39852 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_40628 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g07450.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g19330.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g02370.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g40530.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g41510.1 No alias transcription factor (MYB) 0.07 Archaeplastida
LOC_Os05g04210.1 No alias transcription factor (MYB) 0.08 Archaeplastida
LOC_Os05g48010.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g37210.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os07g48870.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os09g23620.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os11g03440.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os11g47460.1 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10157944g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10426901g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10426901g0020 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10430220g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10433651g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10434028g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_121533g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_12445g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_1261g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_130918g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_14061g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_158099g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_173523g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_17672g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_21440g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_246817g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_278282g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_2797g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_30848g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_31666g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_362115g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_37256g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_45091g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_52293g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_53373g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_6285g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_6393g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_82197g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_83918g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_8464929g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_89624g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_89683g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_93127g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_9374017g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_95747g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.06 Archaeplastida
Mp1g09420.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp3g07510.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp4g04750.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp4g04760.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c16_9970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Pp3c1_21610V3.1 No alias myb domain protein 103 0.03 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.02 Archaeplastida
Pp3c2_37040V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Solyc01g009650.1.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc01g010910.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g067340.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g079280.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g088190.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g089190.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g093890.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc03g119370.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g074170.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc04g077260.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g007160.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g009230.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc05g051550.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g075660.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g008010.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g054840.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc08g076700.1.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc08g076710.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc09g008250.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc09g090790.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g005240.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g005460.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.03 Archaeplastida
Solyc10g055410.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc11g011050.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc12g005640.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc12g099130.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e001399_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001492_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e002893_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e005823_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e007422_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e009849_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e015145_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e015884_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e016791_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e018186_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e019941_P001 No alias transcription factor (MYB) 0.07 Archaeplastida
Zm00001e023733_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e024037_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e026426_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e028201_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e029816_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e034214_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e038287_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e039235_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e041239_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e041547_P001 No alias transcription factor (MYB) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 15 64
IPR001005 SANT/Myb 70 114
No external refs found!