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  5. LOC_Os04g51070.1

LOC_Os04g51070.1


Description : transcription factor (bHLH)


Gene families : OG0003579 (Archaeplastida) Phylogenetic Tree(s): OG0003579_tree ,
OG_05_0002485 (LandPlants) Phylogenetic Tree(s): OG_05_0002485_tree ,
OG_06_0003866 (SeedPlants) Phylogenetic Tree(s): OG_06_0003866_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g51070.1
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
MA_8558922g0010 No alias transcription factor (bHLH) 0.07 Archaeplastida
Smo81013 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 Archaeplastida
Solyc01g081090.2.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc01g081100.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 265 310
No external refs found!