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  5. AMTR_s00005p00254320

AMTR_s00005p00254320 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00005.169

Description : U-box domain-containing protein 7 OS=Arabidopsis thaliana


Gene families : OG0004214 (Archaeplastida) Phylogenetic Tree(s): OG0004214_tree ,
OG_05_0002918 (LandPlants) Phylogenetic Tree(s): OG_05_0002918_tree ,
OG_06_0005518 (SeedPlants) Phylogenetic Tree(s): OG_06_0005518_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00005p00254320
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Zm00001e007747_P003 No alias U-box domain-containing protein 6 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e041111_P003 No alias U-box domain-containing protein 7 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEA Interproscan
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006184 obsolete GTP catabolic process IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0008535 respiratory chain complex IV assembly IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003613 Ubox_domain 281 350
No external refs found!