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  5. LOC_Os04g52250.1

LOC_Os04g52250.1


Description : no hits & (original description: none)


Gene families : OG0000205 (Archaeplastida) Phylogenetic Tree(s): OG0000205_tree ,
OG_05_0000094 (LandPlants) Phylogenetic Tree(s): OG_05_0000094_tree ,
OG_06_0000048 (SeedPlants) Phylogenetic Tree(s): OG_06_0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g52250.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00153720 evm_27.TU.AmTr_v1... 36.4 kDa proline-rich protein OS=Solanum lycopersicum 0.03 Archaeplastida
AT1G62510 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 Archaeplastida
AT3G22120 CWLP cell wall-plasma membrane linker protein 0.03 Archaeplastida
AT4G00165 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
GSVIVT01027641001 No alias Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os03g01300.1 No alias Cortical cell-delineating protein OS=Zea mays... 0.04 Archaeplastida
LOC_Os08g27678.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os10g40480.1 No alias Cortical cell-delineating protein OS=Zea mays... 0.05 Archaeplastida
MA_214375g0010 No alias 36.4 kDa proline-rich protein OS=Solanum lycopersicum... 0.03 Archaeplastida
Solyc03g090990.1.1 No alias pEARLI1-like lipid transfer protein 2 OS=Arabidopsis... 0.02 Archaeplastida
Solyc03g093040.3.1 No alias No annotation 0.03 Archaeplastida
Solyc08g078890.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc08g078900.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e041513_P001 No alias 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR027923 Hydrophob_seed 111 195
No external refs found!