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  5. LOC_Os04g52310.1

LOC_Os04g52310.1


Description : metal cation transporter (ZIP)


Gene families : OG0000307 (Archaeplastida) Phylogenetic Tree(s): OG0000307_tree ,
OG_05_0000241 (LandPlants) Phylogenetic Tree(s): OG_05_0000241_tree ,
OG_06_0000312 (SeedPlants) Phylogenetic Tree(s): OG_06_0000312_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g52310.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00183460 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.ZIP... 0.03 Archaeplastida
AMTR_s00062p00183790 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.ZIP... 0.02 Archaeplastida
AT1G60960 IRT3, ATIRT3 iron regulated transporter 3 0.02 Archaeplastida
AT3G12750 ZIP1 zinc transporter 1 precursor 0.03 Archaeplastida
GSVIVT01014337001 No alias Solute transport.carrier-mediated transport.ZIP... 0.03 Archaeplastida
MA_6126514g0010 No alias metal cation transporter (ZIP) 0.02 Archaeplastida
Solyc02g069190.4.1 No alias metal cation transporter (ZIP) 0.03 Archaeplastida
Solyc02g069200.3.1 No alias metal cation transporter (ZIP) 0.03 Archaeplastida
Solyc02g069210.3.1 No alias metal cation transporter (ZIP) 0.02 Archaeplastida
Solyc05g053370.3.1 No alias metal cation transporter (ZIP) 0.05 Archaeplastida
Solyc07g043230.3.1 No alias metal cation transporter (ZIP) 0.02 Archaeplastida
Solyc08g065190.3.1 No alias metal cation transporter (ZIP) 0.04 Archaeplastida
Zm00001e005195_P002 No alias metal cation transporter (ZIP) 0.02 Archaeplastida
Zm00001e006961_P001 No alias metal cation transporter (ZIP) 0.04 Archaeplastida
Zm00001e033157_P001 No alias metal cation transporter (ZIP) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR003689 ZIP 42 361
No external refs found!