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  5. LOC_Os04g53270.1

LOC_Os04g53270.1


Description : no hits & (original description: none)


Gene families : OG0000098 (Archaeplastida) Phylogenetic Tree(s): OG0000098_tree ,
OG_05_0000033 (LandPlants) Phylogenetic Tree(s): OG_05_0000033_tree ,
OG_06_0000010 (SeedPlants) Phylogenetic Tree(s): OG_06_0000010_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g53270.1
Cluster HCCA: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g06200.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g15190.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os01g19660.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g29370.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os01g35080.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g66450.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g33260.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g35280.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g03240.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g29660.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g36470.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g02200.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g05680.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g06600.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os04g10190.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g21380.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g24080.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g49810.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g04430.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g05010.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g16680.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g17040.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os05g17970.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g20370.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os05g20820.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g24840.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os05g24950.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g28560.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os05g31430.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g41860.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g27950.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os06g29060.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g36140.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os06g45530.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g07830.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g11230.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g13690.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os07g14950.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os07g20690.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os07g26800.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os07g27690.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g31980.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g44520.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os07g45710.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g07230.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g24260.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g27300.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os08g29920.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g42860.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os09g01350.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g04540.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os09g07250.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g07690.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g11030.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g16690.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os09g22350.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os10g13390.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g16690.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g24770.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g31600.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g40160.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os11g12080.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g15100.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g22710.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g24920.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os11g28560.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os11g28720.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g28790.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g33060.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os12g09870.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g14270.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g18030.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g23010.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g23220.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g23540.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g23640.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g26740.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os12g28200.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g28280.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g37330.1 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0004743 pyruvate kinase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006090 pyruvate metabolic process IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006096 glycolytic process IEP Neighborhood
BP GO:0006164 purine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Neighborhood
BP GO:0006754 ATP biosynthetic process IEP Neighborhood
BP GO:0006757 ATP generation from ADP IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
BP GO:0009123 nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009132 nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009141 nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009166 nucleotide catabolic process IEP Neighborhood
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009260 ribonucleotide biosynthetic process IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Neighborhood
BP GO:0019362 pyridine nucleotide metabolic process IEP Neighborhood
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
MF GO:0030955 potassium ion binding IEP Neighborhood
MF GO:0031420 alkali metal ion binding IEP Neighborhood
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0042866 pyruvate biosynthetic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0046031 ADP metabolic process IEP Neighborhood
BP GO:0046034 ATP metabolic process IEP Neighborhood
BP GO:0046390 ribose phosphate biosynthetic process IEP Neighborhood
BP GO:0046434 organophosphate catabolic process IEP Neighborhood
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0046939 nucleotide phosphorylation IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072522 purine-containing compound biosynthetic process IEP Neighborhood
BP GO:0072524 pyridine-containing compound metabolic process IEP Neighborhood
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Neighborhood
BP GO:1901292 nucleoside phosphate catabolic process IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!