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  5. LOC_Os04g54360.1

LOC_Os04g54360.1


Description : Probable galacturonosyltransferase 10 OS=Arabidopsis thaliana (sp|q9skt6|gauta_arath : 645.0)


Gene families : OG0003358 (Archaeplastida) Phylogenetic Tree(s): OG0003358_tree ,
OG_05_0002544 (LandPlants) Phylogenetic Tree(s): OG_05_0002544_tree ,
OG_06_0002342 (SeedPlants) Phylogenetic Tree(s): OG_06_0002342_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g54360.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00153190 evm_27.TU.AmTr_v1... Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana 0.07 Archaeplastida
Gb_12937 No alias Probable galacturonosyltransferase 11 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016757 transferase activity, transferring glycosyl groups IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 259 530
No external refs found!