LOC_Os04g54474.1

Description : transcription factor (bZIP). transcription factor (TGA)

Gene families : OG0000414 (Archaeplastida) Phylogenetic Tree(s): OG0000414_tree ,
OG_05_0000218 (LandPlants) Phylogenetic Tree(s): OG_05_0000218_tree ,
OG_06_0000260 (SeedPlants) Phylogenetic Tree(s): OG_06_0000260_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g54474.1
Cluster	HCCA: Cluster_183

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00231750	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.bZIP...	0.04	Archaeplastida
AT1G08320	bZIP21, TGA9	bZIP transcription factor family protein	0.05	Archaeplastida
AT5G06839	TGA10, bZIP65	bZIP transcription factor family protein	0.04	Archaeplastida
AT5G06960	TGA5, OBF5	OCS-element binding factor 5	0.03	Archaeplastida
AT5G65210	TGA1	bZIP transcription factor family protein	0.02	Archaeplastida
GSVIVT01033531001	No alias	RNA biosynthesis.transcriptional activation.bZIP...	0.03	Archaeplastida
GSVIVT01036134001	No alias	RNA biosynthesis.transcriptional activation.bZIP...	0.03	Archaeplastida
Gb_28099	No alias	transcription factor (bZIP). transcription factor (TGA)....	0.02	Archaeplastida
LOC_Os02g10140.1	No alias	transcription factor (bZIP). transcription factor (TGA)	0.02	Archaeplastida
Solyc04g011670.3.1	No alias	transcription factor (bZIP). transcription factor (TGA)	0.03	Archaeplastida
Solyc04g072460.3.1	No alias	transcription factor (bZIP). transcription factor (TGA)	0.03	Archaeplastida
Solyc05g009660.4.1	No alias	transcription factor (bZIP). transcription factor (TGA)....	0.03	Archaeplastida
Solyc06g074320.3.1	No alias	transcription factor (bZIP). transcription factor (TGA)	0.09	Archaeplastida
Solyc12g056860.2.1	No alias	transcription factor (bZIP). transcription factor (TGA)	0.03	Archaeplastida
Zm00001e006810_P004	No alias	transcription factor (bZIP). transcription factor (TGA)	0.06	Archaeplastida
Zm00001e009331_P001	No alias	transcription factor (bZIP). transcription factor (TGA)	0.08	Archaeplastida
Zm00001e010066_P001	No alias	transcription factor (bZIP). transcription factor (TGA)	0.03	Archaeplastida
Zm00001e014085_P001	No alias	transcription factor (bZIP). transcription factor (TGA)	0.03	Archaeplastida
Zm00001e024141_P002	No alias	transcription factor (bZIP). transcription factor (TGA)	0.03	Archaeplastida
Zm00001e039891_P001	No alias	transcription factor (bZIP). transcription factor (TGA)	0.05	Archaeplastida
Zm00001e041747_P002	No alias	transcription factor (bZIP)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	transcription, DNA-templated	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097659	nucleic acid-templated transcription	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015297	antiporter activity	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR025422	TGA_domain	194	270
IPR004827	bZIP	104	144

External Links

No external refs found!

LOC_Os04g54474.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation