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  5. AMTR_s00005p00260980

AMTR_s00005p00260980 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00005.194

Description : Lipid metabolism.lipid degradation.phospholipase activities.phospholipase D activities.PLD-epsilon-type phospholipase D


Gene families : OG0000212 (Archaeplastida) Phylogenetic Tree(s): OG0000212_tree ,
OG_05_0020341 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0019531 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00005p00260980
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AT5G25370 PLDALPHA3 phospholipase D alpha 3 0.07 Archaeplastida
GSVIVT01035853001 No alias Lipid metabolism.lipid degradation.phospholipase... 0.1 Archaeplastida
Gb_19031 No alias Phospholipase D delta OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os02g02790.1 No alias Phospholipase D delta OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os03g27370.1 No alias phospholipase D (PLD-alpha) 0.06 Archaeplastida
LOC_Os06g40170.1 No alias phospholipase D (PLD-alpha) 0.03 Archaeplastida
LOC_Os06g40180.1 No alias phospholipase D (PLD-alpha) 0.02 Archaeplastida
LOC_Os06g40190.1 No alias phospholipase D (PLD-alpha) 0.03 Archaeplastida
LOC_Os08g31060.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase... 0.02 Archaeplastida
LOC_Os09g25390.1 No alias phospholipase D (PLD-alpha) 0.04 Archaeplastida
MA_170093g0010 No alias Phospholipase D delta OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp2g18270.1 No alias phospholipase D (PLD-alpha) 0.02 Archaeplastida
Pp3c23_8920V3.1 No alias phospholipase D alpha 2 0.03 Archaeplastida
Solyc03g116620.3.1 No alias phospholipase D (PLD-alpha) 0.03 Archaeplastida
Solyc08g080130.3.1 No alias phospholipase D (PLD-beta|gamma) 0.02 Archaeplastida
Solyc12g011170.3.1 No alias phospholipase D (PLD-alpha) 0.1 Archaeplastida
Zm00001e009838_P001 No alias phospholipase D (PLD-alpha) 0.04 Archaeplastida
Zm00001e013490_P001 No alias Phospholipase D delta OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e025885_P001 No alias phospholipase D (PLD-alpha) 0.02 Archaeplastida
Zm00001e031191_P001 No alias phospholipase D (PLD-alpha) 0.03 Archaeplastida
Zm00001e037407_P001 No alias phospholipase D (PLD-alpha) 0.02 Archaeplastida
Zm00001e037985_P001 No alias phospholipase D (PLD-alpha) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0008152 metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006184 obsolete GTP catabolic process IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001736 PLipase_D/transphosphatidylase 258 288
IPR001736 PLipase_D/transphosphatidylase 563 586
IPR024632 PLipase_D_C 627 701
No external refs found!