Description : pectin methylesterase
Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0018082 (LandPlants) Phylogenetic Tree(s): OG_05_0018082_tree ,
OG_06_0017670 (SeedPlants) Phylogenetic Tree(s): OG_06_0017670_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os04g54850.1 | |
Cluster | HCCA: Cluster_122 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00239700 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.15 | Archaeplastida | |
AMTR_s00033p00227850 | evm_27.TU.AmTr_v1... | Probable pectinesterase/pectinesterase inhibitor 21... | 0.1 | Archaeplastida | |
AMTR_s00040p00188020 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.16 | Archaeplastida | |
AMTR_s00129p00028250 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.14 | Archaeplastida | |
AT1G02810 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
AT1G23200 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
AT1G53830 | ATPME2, PME2 | pectin methylesterase 2 | 0.03 | Archaeplastida | |
AT2G26450 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.11 | Archaeplastida | |
AT3G05610 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.09 | Archaeplastida | |
AT3G06830 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.08 | Archaeplastida | |
AT3G10710 | RHS12 | root hair specific 12 | 0.03 | Archaeplastida | |
AT3G43270 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT3G49220 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT4G02300 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT4G15980 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.07 | Archaeplastida | |
AT4G33230 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.08 | Archaeplastida | |
AT5G04960 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT5G04970 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT5G27870 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.06 | Archaeplastida | |
GSVIVT01016667001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
GSVIVT01017687001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.07 | Archaeplastida | |
GSVIVT01018622001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01023135001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01028041001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01028264001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.08 | Archaeplastida | |
GSVIVT01028265001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.11 | Archaeplastida | |
GSVIVT01031165001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.11 | Archaeplastida | |
GSVIVT01035108001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01037352001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
Gb_03174 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Gb_21388 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Gb_24214 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_25439 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Gb_35881 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Gb_36005 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
LOC_Os01g65790.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
LOC_Os07g49100.1 | No alias | pectin methylesterase | 0.08 | Archaeplastida | |
LOC_Os08g34910.1 | No alias | pectin methylesterase | 0.07 | Archaeplastida | |
MA_10434786g0010 | No alias | No annotation | 0.02 | Archaeplastida | |
MA_26888g0010 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
MA_54974g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Mp8g00060.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Mp8g09330.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Pp3c15_12280V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Pp3c17_6440V3.1 | No alias | pectin methylesterase PCR fragment F | 0.02 | Archaeplastida | |
Pp3c18_170V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
Pp3c21_11740V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
Pp3c26_2170V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
Pp3c4_22420V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.05 | Archaeplastida | |
Pp3c8_3840V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Smo420760 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
Smo83744 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
Solyc01g057220.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc01g066360.3.1 | No alias | pectin methylesterase | 0.09 | Archaeplastida | |
Solyc01g066390.4.1 | No alias | Probable pectinesterase/pectinesterase inhibitor 58... | 0.1 | Archaeplastida | |
Solyc01g066420.3.1 | No alias | pectin methylesterase | 0.11 | Archaeplastida | |
Solyc01g099940.3.1 | No alias | pectin methylesterase | 0.09 | Archaeplastida | |
Solyc03g078090.4.1 | No alias | pectin methylesterase | 0.11 | Archaeplastida | |
Solyc03g078100.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc06g034360.2.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc07g017560.4.1 | No alias | pectin methylesterase | 0.09 | Archaeplastida | |
Solyc07g017600.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc09g075330.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc09g075350.4.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Solyc12g099410.2.1 | No alias | pectin methylesterase | 0.12 | Archaeplastida | |
Zm00001e004056_P002 | No alias | no hits & (original description: none) | 0.12 | Archaeplastida | |
Zm00001e006791_P001 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
Zm00001e007917_P002 | No alias | pectin methylesterase | 0.12 | Archaeplastida | |
Zm00001e009863_P001 | No alias | pectin methylesterase | 0.15 | Archaeplastida | |
Zm00001e034231_P001 | No alias | pectin methylesterase | 0.12 | Archaeplastida | |
Zm00001e035932_P003 | No alias | pectin methylesterase | 0.07 | Archaeplastida | |
Zm00001e041006_P001 | No alias | pectin methylesterase | 0.12 | Archaeplastida | |
Zm00001e041757_P001 | No alias | pectin methylesterase | 0.1 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004857 | enzyme inhibitor activity | IEA | Interproscan |
MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
BP | GO:0042545 | cell wall modification | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Neighborhood |
MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Neighborhood |
MF | GO:0005215 | transporter activity | IEP | Neighborhood |
MF | GO:0005216 | ion channel activity | IEP | Neighborhood |
MF | GO:0005509 | calcium ion binding | IEP | Neighborhood |
CC | GO:0005575 | cellular_component | IEP | Neighborhood |
BP | GO:0005976 | polysaccharide metabolic process | IEP | Neighborhood |
BP | GO:0006073 | cellular glucan metabolic process | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006810 | transport | IEP | Neighborhood |
BP | GO:0006811 | ion transport | IEP | Neighborhood |
BP | GO:0006812 | cation transport | IEP | Neighborhood |
MF | GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity | IEP | Neighborhood |
MF | GO:0008324 | cation transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0009250 | glucan biosynthetic process | IEP | Neighborhood |
MF | GO:0015075 | ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015077 | monovalent inorganic cation transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015267 | channel activity | IEP | Neighborhood |
MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015297 | antiporter activity | IEP | Neighborhood |
MF | GO:0015298 | solute:cation antiporter activity | IEP | Neighborhood |
MF | GO:0015299 | solute:proton antiporter activity | IEP | Neighborhood |
MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Neighborhood |
CC | GO:0016020 | membrane | IEP | Neighborhood |
CC | GO:0016021 | integral component of membrane | IEP | Neighborhood |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
MF | GO:0016740 | transferase activity | IEP | Neighborhood |
MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Neighborhood |
MF | GO:0016759 | cellulose synthase activity | IEP | Neighborhood |
MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016829 | lyase activity | IEP | Neighborhood |
MF | GO:0016832 | aldehyde-lyase activity | IEP | Neighborhood |
MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Neighborhood |
MF | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides | IEP | Neighborhood |
MF | GO:0019829 | cation-transporting ATPase activity | IEP | Neighborhood |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0022804 | active transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0022838 | substrate-specific channel activity | IEP | Neighborhood |
MF | GO:0022853 | active ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0030243 | cellulose metabolic process | IEP | Neighborhood |
BP | GO:0030244 | cellulose biosynthetic process | IEP | Neighborhood |
MF | GO:0030570 | pectate lyase activity | IEP | Neighborhood |
MF | GO:0031127 | alpha-(1,2)-fucosyltransferase activity | IEP | Neighborhood |
CC | GO:0031224 | intrinsic component of membrane | IEP | Neighborhood |
CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | Neighborhood |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Neighborhood |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Neighborhood |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
MF | GO:0036442 | proton-exporting ATPase activity | IEP | Neighborhood |
BP | GO:0042546 | cell wall biogenesis | IEP | Neighborhood |
MF | GO:0042625 | ATPase coupled ion transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
BP | GO:0044042 | glucan metabolic process | IEP | Neighborhood |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Neighborhood |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Neighborhood |
CC | GO:0044425 | membrane part | IEP | Neighborhood |
MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | Neighborhood |
MF | GO:0046527 | glucosyltransferase activity | IEP | Neighborhood |
MF | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEP | Neighborhood |
BP | GO:0051179 | localization | IEP | Neighborhood |
BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
BP | GO:0051273 | beta-glucan metabolic process | IEP | Neighborhood |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Neighborhood |
BP | GO:0055085 | transmembrane transport | IEP | Neighborhood |
No external refs found! |