LOC_Os04g54940.1


Description : microtubule plus-end-tracking protein (EB1). MT plus-end-tracking protein (EB1)


Gene families : OG0000931 (Archaeplastida) Phylogenetic Tree(s): OG0000931_tree ,
OG_05_0001300 (LandPlants) Phylogenetic Tree(s): OG_05_0001300_tree ,
OG_06_0007727 (SeedPlants) Phylogenetic Tree(s): OG_06_0007727_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g54940.1
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001206.14 No alias Cell cycle.cytokinesis.phragmoplast microtubule... 0.02 Archaeplastida
MA_98576g0010 No alias microtubule plus-end-tracking protein (EB1). MT... 0.02 Archaeplastida
Smo57110 No alias Cell cycle.cytokinesis.phragmoplast microtubule... 0.02 Archaeplastida
Zm00001e004464_P002 No alias microtubule plus-end-tracking protein (EB1). MT... 0.02 Archaeplastida
Zm00001e006785_P005 No alias microtubule plus-end-tracking protein (EB1). MT... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008017 microtubule binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007064 mitotic sister chromatid cohesion IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
CC GO:0031390 Ctf18 RFC-like complex IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR004953 EB1_C 206 243
IPR001715 CH-domain 22 119
No external refs found!