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  5. LOC_Os04g55520.1

LOC_Os04g55520.1


Description : transcription factor (DREB)


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0001540 (SeedPlants) Phylogenetic Tree(s): OG_06_0001540_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g55520.1
Cluster HCCA: Cluster_280

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00143340 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
AMTR_s00021p00184450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00021p00185480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00040p00196580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00069p00140780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00115p00032780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00150p00091360 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT1G12890 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT1G22985 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT1G25470 No alias AP2 domain-containing transcription factor family protein 0.02 Archaeplastida
AT1G33760 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT1G36060 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT1G77640 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT2G36450 HRD Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT3G16770 ERF72, EBP, ATEBP, RAP2.3 ethylene-responsive element binding protein 0.02 Archaeplastida
AT3G23220 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT3G25890 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT3G50260 DEAR1, CEJ1, ATERF#011 cooperatively regulated by ethylene and jasmonate 1 0.04 Archaeplastida
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.03 Archaeplastida
AT4G18450 No alias Integrase-type DNA-binding superfamily protein 0.07 Archaeplastida
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.07 Archaeplastida
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.07 Archaeplastida
AT5G13330 Rap2.6L related to AP2 6l 0.07 Archaeplastida
AT5G25810 tny Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT5G43410 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G51190 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.07 Archaeplastida
Cre14.g620500 No alias No description available 0.01 Archaeplastida
GSVIVT01001089001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01008649001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01013905001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
GSVIVT01013913001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013916001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01013918001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
GSVIVT01013931001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013935001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01015037001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01018271001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01019860001 No alias External stimuli response.temperature.ICE-CBF cold... 0.02 Archaeplastida
GSVIVT01021060001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01021098001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
GSVIVT01021146001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01028314001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01031747001 No alias Alpha-amylase type B isozyme OS=Hordeum vulgare 0.03 Archaeplastida
GSVIVT01036389001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_01211 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_01212 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_01213 No alias transcription factor (DREB) 0.04 Archaeplastida
Gb_03783 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_07992 No alias Ethylene-responsive transcription factor RAP2-9... 0.03 Archaeplastida
Gb_08031 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_12965 No alias Ethylene-responsive transcription factor ABR1... 0.02 Archaeplastida
Gb_23321 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_24891 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_26067 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_32995 No alias Ethylene-responsive transcription factor ERF016... 0.03 Archaeplastida
Gb_34848 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_41836 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os01g73770.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os02g06330.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g43820.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os02g45420.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os02g45450.1 No alias Dehydration-responsive element-binding protein 1G... 0.07 Archaeplastida
LOC_Os02g55380.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os03g22170.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os04g44670.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os09g13940.2 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os09g28440.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os12g39330.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.04 Archaeplastida
MA_10031781g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_100724g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10082062g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_1037g0020 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_113446g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_135279g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_137148g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_162045g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_184464g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_214063g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_288689g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_364562g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_3758g0010 No alias Ethylene-responsive transcription factor ERF013... 0.04 Archaeplastida
MA_4032g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_4182g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_5530g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_6305g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_7168929g0010 No alias Ethylene-responsive transcription factor ERF016... 0.02 Archaeplastida
MA_78784g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_81029g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_8574268g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_94228g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
MA_9588449g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_959784g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
Mp1g20040.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Mp4g17430.1 No alias Ethylene-responsive transcription factor ERF112... 0.02 Archaeplastida
Mp5g22160.1 No alias Ethylene-responsive transcription factor ERF112... 0.02 Archaeplastida
Mp7g17020.1 No alias Dehydration-responsive element-binding protein 2C... 0.02 Archaeplastida
Pp3c10_20000V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c10_7030V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c21_13130V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c26_1890V3.1 No alias erf domain protein 9 0.02 Archaeplastida
Pp3c3_31490V3.1 No alias C-repeat-binding factor 4 0.02 Archaeplastida
Pp3c3_31500V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c6_28370V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c7_2300V3.1 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
Smo409196 No alias External stimuli response.biotic... 0.02 Archaeplastida
Solyc01g091760.3.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Solyc01g108240.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc02g077370.1.1 No alias transcription factor (ERF) 0.06 Archaeplastida
Solyc02g090770.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc03g005500.1.1 No alias transcription factor (ERF). transcription factor (DREB) 0.03 Archaeplastida
Solyc03g093540.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g093610.1.1 No alias transcription factor (ERF) 0.06 Archaeplastida
Solyc03g118190.4.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc03g124110.2.1 No alias transcription factor (DREB). transcription factor (CBF/DREB1) 0.04 Archaeplastida
Solyc04g014530.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc04g080910.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc05g050790.3.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc06g035700.1.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Solyc06g054630.3.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Solyc06g065820.3.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc06g068360.3.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc06g068830.2.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc06g082590.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc08g007820.1.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Solyc08g007830.1.1 No alias Dehydration-responsive element-binding protein 1F... 0.04 Archaeplastida
Solyc08g078170.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc09g089930.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g009110.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g050970.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g076380.2.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc12g042210.2.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc12g056590.2.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e000400_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e000611_P001 No alias Ethylene-responsive transcription factor ERF073... 0.04 Archaeplastida
Zm00001e001139_P001 No alias Ethylene-responsive transcription factor ERF014... 0.03 Archaeplastida
Zm00001e003579_P001 No alias Ethylene-responsive transcription factor ERF015... 0.02 Archaeplastida
Zm00001e003800_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e006604_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e006982_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007205_P001 No alias Dehydration-responsive element-binding protein 1E... 0.03 Archaeplastida
Zm00001e007350_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007352_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e008306_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e009947_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e013685_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e014413_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e015429_P001 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e015430_P001 No alias Dehydration-responsive element-binding protein 1G... 0.02 Archaeplastida
Zm00001e019159_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e019567_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e019837_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e021579_P001 No alias Pathogenesis-related genes transcriptional activator... 0.03 Archaeplastida
Zm00001e023157_P001 No alias transcription factor (DREB) 0.06 Archaeplastida
Zm00001e023870_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e027351_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e028920_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e029041_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e030090_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e030585_P001 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
Zm00001e031438_P002 No alias Ethylene-responsive transcription factor RAP2-3... 0.02 Archaeplastida
Zm00001e032033_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e034661_P001 No alias Ethylene-responsive transcription factor ERF115... 0.03 Archaeplastida
Zm00001e035837_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e036201_P001 No alias Ethylene-responsive transcription factor ERF014... 0.03 Archaeplastida
Zm00001e038819_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e038888_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e040033_P001 No alias No annotation 0.03 Archaeplastida
Zm00001e041620_P002 No alias transcription factor (ERF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 61 110
No external refs found!