1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g55640.1

LOC_Os04g55640.1


Description : Protein IRX15-LIKE OS=Arabidopsis thaliana (sp|q9fh92|ix15l_arath : 218.0)


Gene families : OG0000727 (Archaeplastida) Phylogenetic Tree(s): OG0000727_tree ,
OG_05_0000525 (LandPlants) Phylogenetic Tree(s): OG_05_0000525_tree ,
OG_06_0003000 (SeedPlants) Phylogenetic Tree(s): OG_06_0003000_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g55640.1
Cluster HCCA: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00191940 evm_27.TU.AmTr_v1... Protein IRREGULAR XYLEM 15 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00099p00012720 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xylan.modification and... 0.05 Archaeplastida
AT1G09610 No alias Protein of unknown function (DUF579) 0.08 Archaeplastida
AT1G33800 No alias Protein of unknown function (DUF579) 0.05 Archaeplastida
AT1G67330 No alias Protein of unknown function (DUF579) 0.05 Archaeplastida
AT1G71690 No alias Protein of unknown function (DUF579) 0.02 Archaeplastida
AT2G15440 No alias Protein of unknown function (DUF579) 0.03 Archaeplastida
AT3G50220 No alias Protein of unknown function (DUF579) 0.08 Archaeplastida
AT4G09990 No alias Protein of unknown function (DUF579) 0.04 Archaeplastida
AT5G67210 No alias Protein of unknown function (DUF579) 0.1 Archaeplastida
GSVIVT01004862001 No alias Cell wall.hemicellulose.xylan.modification and... 0.04 Archaeplastida
GSVIVT01023202001 No alias No description available 0.07 Archaeplastida
GSVIVT01023221001 No alias Glucuronoxylan 4-O-methyltransferase 3 OS=Arabidopsis thaliana 0.08 Archaeplastida
Gb_12265 No alias glucuronoxylan 4-O-methyltransferase 0.05 Archaeplastida
Gb_31046 No alias glucuronoxylan 4-O-methyltransferase 0.05 Archaeplastida
Gb_35413 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os02g06380.1 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os06g47310.1 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os11g13870.1 No alias Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os12g10320.1 No alias glucuronoxylan 4-O-methyltransferase 0.05 Archaeplastida
MA_10430239g0010 No alias glucuronoxylan 4-O-methyltransferase 0.06 Archaeplastida
MA_195978g0010 No alias Probable methyltransferase At1g27930 OS=Arabidopsis... 0.03 Archaeplastida
MA_58340g0010 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.07 Archaeplastida
Pp3c16_5380V3.1 No alias Protein of unknown function (DUF579) 0.03 Archaeplastida
Smo57632 No alias Glucuronoxylan 4-O-methyltransferase 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g103360.4.1 No alias glucuronoxylan 4-O-methyltransferase 0.07 Archaeplastida
Solyc02g064945.1.1 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.07 Archaeplastida
Solyc02g093090.1.1 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc03g110890.1.1 No alias Probable methyltransferase At1g27930 OS=Arabidopsis... 0.09 Archaeplastida
Solyc05g015497.1.1 No alias Probable methyltransferase At1g27930 OS=Arabidopsis... 0.07 Archaeplastida
Solyc06g064800.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc11g031950.1.1 No alias glucuronoxylan 4-O-methyltransferase 0.09 Archaeplastida
Zm00001e006478_P001 No alias Probable methyltransferase At1g27930 OS=Arabidopsis... 0.07 Archaeplastida
Zm00001e006744_P001 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.09 Archaeplastida
Zm00001e011047_P001 No alias Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis... 0.11 Archaeplastida
Zm00001e013688_P001 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e039770_P002 No alias glucuronoxylan 4-O-methyltransferase 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
InterPro domains Description Start Stop
IPR021148 Polysacc_synth_dom 99 289
No external refs found!